The complete mitochondrial genome of Goniurosaurus varius (Squamata: Eublepharidae)
AbstractThe complete mitochondrial genome sequence of Goniurosaurus varius is 17778 bp in length (GenBank accession number OQ992199), containing 13 protein-coding genes, 2 rRNA genes, and 22 tRNA genes. The gene order and orientation are identical to those of other Eublepharidae species in the GenBa...
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| Format: | Article |
| Language: | English |
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Taylor & Francis Group
2023-11-01
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| Series: | Mitochondrial DNA. Part B. Resources |
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| Online Access: | https://www.tandfonline.com/doi/10.1080/23802359.2023.2278817 |
| _version_ | 1827308541052977152 |
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| author | Zhengyan Zhou Lin Ding Ziyi Liu Longming Fu Lanying Xu Lin Feng Sufan Yu Pipeng Li Yu Zhou |
| author_facet | Zhengyan Zhou Lin Ding Ziyi Liu Longming Fu Lanying Xu Lin Feng Sufan Yu Pipeng Li Yu Zhou |
| author_sort | Zhengyan Zhou |
| collection | DOAJ |
| description | AbstractThe complete mitochondrial genome sequence of Goniurosaurus varius is 17778 bp in length (GenBank accession number OQ992199), containing 13 protein-coding genes, 2 rRNA genes, and 22 tRNA genes. The gene order and orientation are identical to those of other Eublepharidae species in the GenBank database. Seven protein-coding genes (COX2, COX3, ND1, ND2, ND3, ND4 and CYTB) exhibit incomplete stop codon ‘T.’ Phylogenetic analysis revealed the monophyly of Goniurosaurus and Eublepharidae and suggested that G. varius is closely related to the lineage composed of G. luii and G. liboensis. Distinct from other published Eublepharidae species, G. varius contains an extra non-coding region between tRNA-Thr and tRNA-Pro, which may be formed by gene rearrangements. The complete mitochondrial genome will be helpful for further studies on the population genetics of this species and phylogenetic analyses of Eublepharidae. |
| first_indexed | 2024-03-08T15:56:37Z |
| format | Article |
| id | doaj.art-73888f8c07564ac6bb4abc49e29927ca |
| institution | Directory Open Access Journal |
| issn | 2380-2359 |
| language | English |
| last_indexed | 2024-04-24T19:10:45Z |
| publishDate | 2023-11-01 |
| publisher | Taylor & Francis Group |
| record_format | Article |
| series | Mitochondrial DNA. Part B. Resources |
| spelling | doaj.art-73888f8c07564ac6bb4abc49e29927ca2024-03-26T11:04:23ZengTaylor & Francis GroupMitochondrial DNA. Part B. Resources2380-23592023-11-018111215121910.1080/23802359.2023.2278817The complete mitochondrial genome of Goniurosaurus varius (Squamata: Eublepharidae)Zhengyan Zhou0Lin Ding1Ziyi Liu2Longming Fu3Lanying Xu4Lin Feng5Sufan Yu6Pipeng Li7Yu Zhou8College of Life Science and bioengineering, Shenyang University, Shenyang, ChinaCollege of Life Science and bioengineering, Shenyang University, Shenyang, ChinaCollege of Life Science and bioengineering, Shenyang University, Shenyang, ChinaCollege of Life Science and bioengineering, Shenyang University, Shenyang, ChinaCollege of Life Science and bioengineering, Shenyang University, Shenyang, ChinaCollege of Life Science and bioengineering, Shenyang University, Shenyang, ChinaCollege of Life Science and bioengineering, Shenyang University, Shenyang, ChinaInstitute of Herpetology, Shenyang Normal University, Shenyang, ChinaCollege of Life Science, Shenyang Normal University, Shenyang, ChinaAbstractThe complete mitochondrial genome sequence of Goniurosaurus varius is 17778 bp in length (GenBank accession number OQ992199), containing 13 protein-coding genes, 2 rRNA genes, and 22 tRNA genes. The gene order and orientation are identical to those of other Eublepharidae species in the GenBank database. Seven protein-coding genes (COX2, COX3, ND1, ND2, ND3, ND4 and CYTB) exhibit incomplete stop codon ‘T.’ Phylogenetic analysis revealed the monophyly of Goniurosaurus and Eublepharidae and suggested that G. varius is closely related to the lineage composed of G. luii and G. liboensis. Distinct from other published Eublepharidae species, G. varius contains an extra non-coding region between tRNA-Thr and tRNA-Pro, which may be formed by gene rearrangements. The complete mitochondrial genome will be helpful for further studies on the population genetics of this species and phylogenetic analyses of Eublepharidae.https://www.tandfonline.com/doi/10.1080/23802359.2023.2278817Goniurosaurus variusIllumina sequencingmitogenomephylogenetic analysis |
| spellingShingle | Zhengyan Zhou Lin Ding Ziyi Liu Longming Fu Lanying Xu Lin Feng Sufan Yu Pipeng Li Yu Zhou The complete mitochondrial genome of Goniurosaurus varius (Squamata: Eublepharidae) Mitochondrial DNA. Part B. Resources Goniurosaurus varius Illumina sequencing mitogenome phylogenetic analysis |
| title | The complete mitochondrial genome of Goniurosaurus varius (Squamata: Eublepharidae) |
| title_full | The complete mitochondrial genome of Goniurosaurus varius (Squamata: Eublepharidae) |
| title_fullStr | The complete mitochondrial genome of Goniurosaurus varius (Squamata: Eublepharidae) |
| title_full_unstemmed | The complete mitochondrial genome of Goniurosaurus varius (Squamata: Eublepharidae) |
| title_short | The complete mitochondrial genome of Goniurosaurus varius (Squamata: Eublepharidae) |
| title_sort | complete mitochondrial genome of goniurosaurus varius squamata eublepharidae |
| topic | Goniurosaurus varius Illumina sequencing mitogenome phylogenetic analysis |
| url | https://www.tandfonline.com/doi/10.1080/23802359.2023.2278817 |
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