The complete chloroplast genome sequence and phylogenetic position of Aconitum quelpaertense Nakai (Ranunculaceae)
Aconitum quelpaertense Nakai is an endemic species of Jeju Island of South Korea. Here, we characterized complete chloroplast genome sequence of A. quelpaertense and inferred its phylogenetic position within the genus Aconitum. The complete chloroplast genome was 155,636 bp in length with typical qu...
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| Format: | Article |
| Language: | English |
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Elsevier
2023-06-01
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| Series: | Journal of Asia-Pacific Biodiversity |
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| Online Access: | http://www.sciencedirect.com/science/article/pii/S2287884X22001182 |
| _version_ | 1797818645162754048 |
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| author | Tae-Hee Kim Young-Ho Ha Se Ryeong Lee Sang-Chul Kim Jungsim Lee Dong-Kap Kim Hyuk-Jin Kim |
| author_facet | Tae-Hee Kim Young-Ho Ha Se Ryeong Lee Sang-Chul Kim Jungsim Lee Dong-Kap Kim Hyuk-Jin Kim |
| author_sort | Tae-Hee Kim |
| collection | DOAJ |
| description | Aconitum quelpaertense Nakai is an endemic species of Jeju Island of South Korea. Here, we characterized complete chloroplast genome sequence of A. quelpaertense and inferred its phylogenetic position within the genus Aconitum. The complete chloroplast genome was 155,636 bp in length with typical quadripartite structure. Length of large single copy was 86,695 bp, whereas small single copy was 17,087 bp. A pair of inverted repeats were 25,927 bp. In total, 128 genes were encoded and comprising 83 protein-coding genes, 37 tRNA genes and eight rRNA genes. rpl32 and rps16 genes were pseudogenized in this plastome. The phylogenetic analysis based on complete chloroplast genome sequences showed that A. quelpaertense was closely related to another endemic species of South Korea, A. pseudolaeve. |
| first_indexed | 2024-03-13T09:12:13Z |
| format | Article |
| id | doaj.art-75003cebee2f43cc9e9bedec0b1954fd |
| institution | Directory Open Access Journal |
| issn | 2287-884X |
| language | English |
| last_indexed | 2024-03-13T09:12:13Z |
| publishDate | 2023-06-01 |
| publisher | Elsevier |
| record_format | Article |
| series | Journal of Asia-Pacific Biodiversity |
| spelling | doaj.art-75003cebee2f43cc9e9bedec0b1954fd2023-05-27T04:25:30ZengElsevierJournal of Asia-Pacific Biodiversity2287-884X2023-06-01162282286The complete chloroplast genome sequence and phylogenetic position of Aconitum quelpaertense Nakai (Ranunculaceae)Tae-Hee Kim0Young-Ho Ha1Se Ryeong Lee2Sang-Chul Kim3Jungsim Lee4Dong-Kap Kim5Hyuk-Jin Kim6Forest Biodiversity Division, Korea National Arboretum, 415 Gwangneungsumogwon-ro, Soheul-eup, Pocheon-si, Gyeonggi-do 11186, Republic of KoreaForest Biodiversity Division, Korea National Arboretum, 415 Gwangneungsumogwon-ro, Soheul-eup, Pocheon-si, Gyeonggi-do 11186, Republic of KoreaForest Biodiversity Division, Korea National Arboretum, 415 Gwangneungsumogwon-ro, Soheul-eup, Pocheon-si, Gyeonggi-do 11186, Republic of KoreaForest Biodiversity Division, Korea National Arboretum, 415 Gwangneungsumogwon-ro, Soheul-eup, Pocheon-si, Gyeonggi-do 11186, Republic of KoreaForest Biodiversity Division, Korea National Arboretum, 415 Gwangneungsumogwon-ro, Soheul-eup, Pocheon-si, Gyeonggi-do 11186, Republic of KoreaForest Environment Conservation Division, Korea Forest Service, 189 Cheongsa-ro, Seo-gu, Daejeon 35208, Republic of KoreaForest Biodiversity Division, Korea National Arboretum, 415 Gwangneungsumogwon-ro, Soheul-eup, Pocheon-si, Gyeonggi-do 11186, Republic of Korea; Corresponding author. Tel.: +82 31 540 8811Aconitum quelpaertense Nakai is an endemic species of Jeju Island of South Korea. Here, we characterized complete chloroplast genome sequence of A. quelpaertense and inferred its phylogenetic position within the genus Aconitum. The complete chloroplast genome was 155,636 bp in length with typical quadripartite structure. Length of large single copy was 86,695 bp, whereas small single copy was 17,087 bp. A pair of inverted repeats were 25,927 bp. In total, 128 genes were encoded and comprising 83 protein-coding genes, 37 tRNA genes and eight rRNA genes. rpl32 and rps16 genes were pseudogenized in this plastome. The phylogenetic analysis based on complete chloroplast genome sequences showed that A. quelpaertense was closely related to another endemic species of South Korea, A. pseudolaeve.http://www.sciencedirect.com/science/article/pii/S2287884X22001182Aconitum quelpaertenseChloroplast genomeEndemic speciesLycoctonum |
| spellingShingle | Tae-Hee Kim Young-Ho Ha Se Ryeong Lee Sang-Chul Kim Jungsim Lee Dong-Kap Kim Hyuk-Jin Kim The complete chloroplast genome sequence and phylogenetic position of Aconitum quelpaertense Nakai (Ranunculaceae) Journal of Asia-Pacific Biodiversity Aconitum quelpaertense Chloroplast genome Endemic species Lycoctonum |
| title | The complete chloroplast genome sequence and phylogenetic position of Aconitum quelpaertense Nakai (Ranunculaceae) |
| title_full | The complete chloroplast genome sequence and phylogenetic position of Aconitum quelpaertense Nakai (Ranunculaceae) |
| title_fullStr | The complete chloroplast genome sequence and phylogenetic position of Aconitum quelpaertense Nakai (Ranunculaceae) |
| title_full_unstemmed | The complete chloroplast genome sequence and phylogenetic position of Aconitum quelpaertense Nakai (Ranunculaceae) |
| title_short | The complete chloroplast genome sequence and phylogenetic position of Aconitum quelpaertense Nakai (Ranunculaceae) |
| title_sort | complete chloroplast genome sequence and phylogenetic position of aconitum quelpaertense nakai ranunculaceae |
| topic | Aconitum quelpaertense Chloroplast genome Endemic species Lycoctonum |
| url | http://www.sciencedirect.com/science/article/pii/S2287884X22001182 |
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