The complete chloroplast genome sequence of Artocarpus gomezianus (Moraceae) from Xishuangbanna, China
Artocarpus gomezianus is a medicinal species native to Asia. To infer its phylogenetic relationship to the other Moraceae, the complete chloroplast genome of A. gomezianus was sequenced. The whole chloroplast genome is 160,743 bp in length, consisting of a pair of inverted repeat (IR) regions of 25,...
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| Format: | Article |
| Language: | English |
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Taylor & Francis Group
2021-10-01
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| Series: | Mitochondrial DNA. Part B. Resources |
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| Online Access: | http://dx.doi.org/10.1080/23802359.2021.1973603 |
| _version_ | 1797638711264935936 |
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| author | Xinggu Lin Tao Lin Sun Zhixia Arief Priyadi |
| author_facet | Xinggu Lin Tao Lin Sun Zhixia Arief Priyadi |
| author_sort | Xinggu Lin |
| collection | DOAJ |
| description | Artocarpus gomezianus is a medicinal species native to Asia. To infer its phylogenetic relationship to the other Moraceae, the complete chloroplast genome of A. gomezianus was sequenced. The whole chloroplast genome is 160,743 bp in length, consisting of a pair of inverted repeat (IR) regions of 25,691 bp, one large single-copy (LSC) region of 89,241 bp, and one small singlecopy (SSC) region of 20,120 bp. The overall GC content of the complete chloroplast genome is 35.81%. Maximum likelihood analysis using 11 complete plastomes of the Moraceae and Cannabis sativa (Cannabaceae) designated as the outgroup, resolved A. gomezianus in a clade with A. petelotii and A. hypargyreus. These phylogenetic results are not consistent with previous findings based on nuclear loci in which A. gomezianus was grouped as a sister to a clade containing A. petelotii and A. hypargyreus. The complete chloroplast genome of A. gomezianus will provide a powerful tool to accelerate pharmacological development, systematics, and future phylogenetic studies in the Moraceae. |
| first_indexed | 2024-03-11T13:07:31Z |
| format | Article |
| id | doaj.art-7574604a07d44e0b8b967b5d0ead4b7a |
| institution | Directory Open Access Journal |
| issn | 2380-2359 |
| language | English |
| last_indexed | 2024-03-11T13:07:31Z |
| publishDate | 2021-10-01 |
| publisher | Taylor & Francis Group |
| record_format | Article |
| series | Mitochondrial DNA. Part B. Resources |
| spelling | doaj.art-7574604a07d44e0b8b967b5d0ead4b7a2023-11-03T14:28:31ZengTaylor & Francis GroupMitochondrial DNA. Part B. Resources2380-23592021-10-016102890289210.1080/23802359.2021.19736031973603The complete chloroplast genome sequence of Artocarpus gomezianus (Moraceae) from Xishuangbanna, ChinaXinggu Lin0Tao Lin1Sun Zhixia2Arief Priyadi3Key Laboratory of Plant Resources Conservation and Sustainable Utilization, South China Botanical Garden, Chinese Academy of SciencesKey Laboratory of Plant Resources Conservation and Sustainable Utilization, South China Botanical Garden, Chinese Academy of SciencesFujian Provincial Key Laboratory of the Development and Utilization of Bamboo Resources, Sanming UniversityBali Botanic Garden - Research Center for Plant Conservation and Botanic Gardens, Indonesian Institute of Sciences (LIPI)Artocarpus gomezianus is a medicinal species native to Asia. To infer its phylogenetic relationship to the other Moraceae, the complete chloroplast genome of A. gomezianus was sequenced. The whole chloroplast genome is 160,743 bp in length, consisting of a pair of inverted repeat (IR) regions of 25,691 bp, one large single-copy (LSC) region of 89,241 bp, and one small singlecopy (SSC) region of 20,120 bp. The overall GC content of the complete chloroplast genome is 35.81%. Maximum likelihood analysis using 11 complete plastomes of the Moraceae and Cannabis sativa (Cannabaceae) designated as the outgroup, resolved A. gomezianus in a clade with A. petelotii and A. hypargyreus. These phylogenetic results are not consistent with previous findings based on nuclear loci in which A. gomezianus was grouped as a sister to a clade containing A. petelotii and A. hypargyreus. The complete chloroplast genome of A. gomezianus will provide a powerful tool to accelerate pharmacological development, systematics, and future phylogenetic studies in the Moraceae.http://dx.doi.org/10.1080/23802359.2021.1973603artocarpus gomezianuschloroplast genomemedicinal plants |
| spellingShingle | Xinggu Lin Tao Lin Sun Zhixia Arief Priyadi The complete chloroplast genome sequence of Artocarpus gomezianus (Moraceae) from Xishuangbanna, China Mitochondrial DNA. Part B. Resources artocarpus gomezianus chloroplast genome medicinal plants |
| title | The complete chloroplast genome sequence of Artocarpus gomezianus (Moraceae) from Xishuangbanna, China |
| title_full | The complete chloroplast genome sequence of Artocarpus gomezianus (Moraceae) from Xishuangbanna, China |
| title_fullStr | The complete chloroplast genome sequence of Artocarpus gomezianus (Moraceae) from Xishuangbanna, China |
| title_full_unstemmed | The complete chloroplast genome sequence of Artocarpus gomezianus (Moraceae) from Xishuangbanna, China |
| title_short | The complete chloroplast genome sequence of Artocarpus gomezianus (Moraceae) from Xishuangbanna, China |
| title_sort | complete chloroplast genome sequence of artocarpus gomezianus moraceae from xishuangbanna china |
| topic | artocarpus gomezianus chloroplast genome medicinal plants |
| url | http://dx.doi.org/10.1080/23802359.2021.1973603 |
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