Contact prediction is hardest for the most informative contacts, but improves with the incorporation of contact potentials.

Co-evolution between pairs of residues in a multiple sequence alignment (MSA) of homologous proteins has long been proposed as an indicator of structural contacts. Recently, several methods, such as direct-coupling analysis (DCA) and MetaPSICOV, have been shown to achieve impressive rates of contact...

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Hlavní autoři: Jack Holland, Qinxin Pan, Gevorg Grigoryan
Médium: Článek
Jazyk:English
Vydáno: Public Library of Science (PLoS) 2018-01-01
Edice:PLoS ONE
On-line přístup:https://journals.plos.org/plosone/article/file?id=10.1371/journal.pone.0199585&type=printable