Complete plastid genome of two Dalbergia species (Fabaceae), and their significance in conservation and phylogeny
Dalbergia (Fabaceae) is a pantropical genus. Due to high economic and ecological values, many Dalbergia species were assessed as threatened taxa. In this study, we reported the complete plastome of two Dalbergia species, D. odorifera and D. oliveri, that was 155,838 bp and 156,074 bp in size, respec...
| Main Authors: | , , , , |
|---|---|
| Format: | Article |
| Language: | English |
| Published: |
Taylor & Francis Group
2020-04-01
|
| Series: | Mitochondrial DNA. Part B. Resources |
| Subjects: | |
| Online Access: | http://dx.doi.org/10.1080/23802359.2020.1756487 |
| _version_ | 1797639218764185600 |
|---|---|
| author | Pyae Pyae Win Xin Li Li-Qiong Chen Yun-Hong Tan Wen-Bin Yu |
| author_facet | Pyae Pyae Win Xin Li Li-Qiong Chen Yun-Hong Tan Wen-Bin Yu |
| author_sort | Pyae Pyae Win |
| collection | DOAJ |
| description | Dalbergia (Fabaceae) is a pantropical genus. Due to high economic and ecological values, many Dalbergia species were assessed as threatened taxa. In this study, we reported the complete plastome of two Dalbergia species, D. odorifera and D. oliveri, that was 155,838 bp and 156,074 bp in size, respectively. Comparative analyses showed Dalbergia plastomes were conserved in genome size, structure, and gene contents. Four nucleotide diversity hotspots of Dalbergia genomes were rpl32-ndhF, rpl32-trnLUAG, trnLUAA, and trnTACA-trnLUAA. Phylogenetic analysis revealed the sister relationship between D. odorifera and D. hainanensis, and between D. oliveri and D. assamica, respectively. The complete plastomes can provide the important information for investigations on conservation genetics and phylogenies of Dalbergia and Fabaceae. |
| first_indexed | 2024-03-11T13:14:45Z |
| format | Article |
| id | doaj.art-7620be6c42804da18a2bb9ee85cb7e07 |
| institution | Directory Open Access Journal |
| issn | 2380-2359 |
| language | English |
| last_indexed | 2024-03-11T13:14:45Z |
| publishDate | 2020-04-01 |
| publisher | Taylor & Francis Group |
| record_format | Article |
| series | Mitochondrial DNA. Part B. Resources |
| spelling | doaj.art-7620be6c42804da18a2bb9ee85cb7e072023-11-03T13:50:21ZengTaylor & Francis GroupMitochondrial DNA. Part B. Resources2380-23592020-04-01521967196910.1080/23802359.2020.17564871756487Complete plastid genome of two Dalbergia species (Fabaceae), and their significance in conservation and phylogenyPyae Pyae Win0Xin Li1Li-Qiong Chen2Yun-Hong Tan3Wen-Bin Yu4Xishuangbanna Tropical Botanical Garden, Chinese Academy of SciencesXishuangbanna Tropical Botanical Garden, Chinese Academy of SciencesXishuangbanna Tropical Botanical Garden, Chinese Academy of SciencesXishuangbanna Tropical Botanical Garden, Chinese Academy of SciencesXishuangbanna Tropical Botanical Garden, Chinese Academy of SciencesDalbergia (Fabaceae) is a pantropical genus. Due to high economic and ecological values, many Dalbergia species were assessed as threatened taxa. In this study, we reported the complete plastome of two Dalbergia species, D. odorifera and D. oliveri, that was 155,838 bp and 156,074 bp in size, respectively. Comparative analyses showed Dalbergia plastomes were conserved in genome size, structure, and gene contents. Four nucleotide diversity hotspots of Dalbergia genomes were rpl32-ndhF, rpl32-trnLUAG, trnLUAA, and trnTACA-trnLUAA. Phylogenetic analysis revealed the sister relationship between D. odorifera and D. hainanensis, and between D. oliveri and D. assamica, respectively. The complete plastomes can provide the important information for investigations on conservation genetics and phylogenies of Dalbergia and Fabaceae.http://dx.doi.org/10.1080/23802359.2020.1756487chloroplast genomeconservation geneticsdalbergiafabaceaeplastome |
| spellingShingle | Pyae Pyae Win Xin Li Li-Qiong Chen Yun-Hong Tan Wen-Bin Yu Complete plastid genome of two Dalbergia species (Fabaceae), and their significance in conservation and phylogeny Mitochondrial DNA. Part B. Resources chloroplast genome conservation genetics dalbergia fabaceae plastome |
| title | Complete plastid genome of two Dalbergia species (Fabaceae), and their significance in conservation and phylogeny |
| title_full | Complete plastid genome of two Dalbergia species (Fabaceae), and their significance in conservation and phylogeny |
| title_fullStr | Complete plastid genome of two Dalbergia species (Fabaceae), and their significance in conservation and phylogeny |
| title_full_unstemmed | Complete plastid genome of two Dalbergia species (Fabaceae), and their significance in conservation and phylogeny |
| title_short | Complete plastid genome of two Dalbergia species (Fabaceae), and their significance in conservation and phylogeny |
| title_sort | complete plastid genome of two dalbergia species fabaceae and their significance in conservation and phylogeny |
| topic | chloroplast genome conservation genetics dalbergia fabaceae plastome |
| url | http://dx.doi.org/10.1080/23802359.2020.1756487 |
| work_keys_str_mv | AT pyaepyaewin completeplastidgenomeoftwodalbergiaspeciesfabaceaeandtheirsignificanceinconservationandphylogeny AT xinli completeplastidgenomeoftwodalbergiaspeciesfabaceaeandtheirsignificanceinconservationandphylogeny AT liqiongchen completeplastidgenomeoftwodalbergiaspeciesfabaceaeandtheirsignificanceinconservationandphylogeny AT yunhongtan completeplastidgenomeoftwodalbergiaspeciesfabaceaeandtheirsignificanceinconservationandphylogeny AT wenbinyu completeplastidgenomeoftwodalbergiaspeciesfabaceaeandtheirsignificanceinconservationandphylogeny |