The complete chloroplast genome of Solanum sisymbriifolium (Solanaceae), the wild eggplant
Solanum sisymbriifolium is a critical wild eggplant resource with resistance to many serious diseases that affect eggplant production. In this study, the chloroplast genome of S. sisymbriifolium was successfully sequenced using Illumina high-throughput sequencing technology. The length of the comple...
| Main Authors: | , , , , , , , , |
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| Format: | Article |
| Language: | English |
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Taylor & Francis Group
2022-05-01
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| Series: | Mitochondrial DNA. Part B. Resources |
| Subjects: | |
| Online Access: | http://dx.doi.org/10.1080/23802359.2022.2077667 |
| _version_ | 1797638643332939776 |
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| author | Mengying Yin Yanan Yu Yaju Gong Min Gui Zhibin Li Rui Bao Jie Cheng Guanghui Du Liyan Wu |
| author_facet | Mengying Yin Yanan Yu Yaju Gong Min Gui Zhibin Li Rui Bao Jie Cheng Guanghui Du Liyan Wu |
| author_sort | Mengying Yin |
| collection | DOAJ |
| description | Solanum sisymbriifolium is a critical wild eggplant resource with resistance to many serious diseases that affect eggplant production. In this study, the chloroplast genome of S. sisymbriifolium was successfully sequenced using Illumina high-throughput sequencing technology. The length of the complete chloroplast genome is 155,771 bp, and its GC content is 37.76%. There is a large single-copy region (86,404 bp), a small single-copy region (18,525 bp), and a pair of inverted repeat regions (25,421 bp) in the chloroplast genome. A total of 128 coding genes were annotated in the entire chloroplast genome, including 83 protein-coding genes, 37 transfer RNA genes and eight ribosomal RNA genes. The phylogenetic tree of 17 complete chloroplast genomes shows that S. sisymbriifolium is closely related to Solanum wrightii. |
| first_indexed | 2024-03-11T13:05:34Z |
| format | Article |
| id | doaj.art-7754fe87e3174444b48f71ec89640fd3 |
| institution | Directory Open Access Journal |
| issn | 2380-2359 |
| language | English |
| last_indexed | 2024-03-11T13:05:34Z |
| publishDate | 2022-05-01 |
| publisher | Taylor & Francis Group |
| record_format | Article |
| series | Mitochondrial DNA. Part B. Resources |
| spelling | doaj.art-7754fe87e3174444b48f71ec89640fd32023-11-03T14:36:03ZengTaylor & Francis GroupMitochondrial DNA. Part B. Resources2380-23592022-05-017588688810.1080/23802359.2022.20776672077667The complete chloroplast genome of Solanum sisymbriifolium (Solanaceae), the wild eggplantMengying Yin0Yanan Yu1Yaju Gong2Min Gui3Zhibin Li4Rui Bao5Jie Cheng6Guanghui Du7Liyan Wu8Institute of Resource Plants, Yunnan UniversityInstitute of Resource Plants, Yunnan UniversityHorticultural Research Institute, Yunnan Academy of Agricultural SciencesHorticultural Research Institute, Yunnan Academy of Agricultural SciencesHorticultural Research Institute, Yunnan Academy of Agricultural SciencesHorticultural Research Institute, Yunnan Academy of Agricultural SciencesInstitute of Resource Plants, Yunnan UniversityInstitute of Resource Plants, Yunnan UniversityHorticultural Research Institute, Yunnan Academy of Agricultural SciencesSolanum sisymbriifolium is a critical wild eggplant resource with resistance to many serious diseases that affect eggplant production. In this study, the chloroplast genome of S. sisymbriifolium was successfully sequenced using Illumina high-throughput sequencing technology. The length of the complete chloroplast genome is 155,771 bp, and its GC content is 37.76%. There is a large single-copy region (86,404 bp), a small single-copy region (18,525 bp), and a pair of inverted repeat regions (25,421 bp) in the chloroplast genome. A total of 128 coding genes were annotated in the entire chloroplast genome, including 83 protein-coding genes, 37 transfer RNA genes and eight ribosomal RNA genes. The phylogenetic tree of 17 complete chloroplast genomes shows that S. sisymbriifolium is closely related to Solanum wrightii.http://dx.doi.org/10.1080/23802359.2022.2077667solanum sisymbriifoliumchloroplast genomephylogenetic tree |
| spellingShingle | Mengying Yin Yanan Yu Yaju Gong Min Gui Zhibin Li Rui Bao Jie Cheng Guanghui Du Liyan Wu The complete chloroplast genome of Solanum sisymbriifolium (Solanaceae), the wild eggplant Mitochondrial DNA. Part B. Resources solanum sisymbriifolium chloroplast genome phylogenetic tree |
| title | The complete chloroplast genome of Solanum sisymbriifolium (Solanaceae), the wild eggplant |
| title_full | The complete chloroplast genome of Solanum sisymbriifolium (Solanaceae), the wild eggplant |
| title_fullStr | The complete chloroplast genome of Solanum sisymbriifolium (Solanaceae), the wild eggplant |
| title_full_unstemmed | The complete chloroplast genome of Solanum sisymbriifolium (Solanaceae), the wild eggplant |
| title_short | The complete chloroplast genome of Solanum sisymbriifolium (Solanaceae), the wild eggplant |
| title_sort | complete chloroplast genome of solanum sisymbriifolium solanaceae the wild eggplant |
| topic | solanum sisymbriifolium chloroplast genome phylogenetic tree |
| url | http://dx.doi.org/10.1080/23802359.2022.2077667 |
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