Open-access metabolomics databases for natural product research: present capabilities and future potential
Various databases have been developed to aid in assigning structures to spectral peaks observed in metabolomics experiments. In this review article, we discuss the utility of currently available open-access spectral and chemical databases for natural products discovery. We also provide recommendatio...
| Main Authors: | , |
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| Format: | Article |
| Language: | English |
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Frontiers Media S.A.
2015-03-01
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| Series: | Frontiers in Bioengineering and Biotechnology |
| Subjects: | |
| Online Access: | http://journal.frontiersin.org/Journal/10.3389/fbioe.2015.00022/full |
| _version_ | 1830518908369502208 |
|---|---|
| author | Sean R Johnson Bernd Markus Lange |
| author_facet | Sean R Johnson Bernd Markus Lange |
| author_sort | Sean R Johnson |
| collection | DOAJ |
| description | Various databases have been developed to aid in assigning structures to spectral peaks observed in metabolomics experiments. In this review article, we discuss the utility of currently available open-access spectral and chemical databases for natural products discovery. We also provide recommendations on how the research community can contribute to further improvements |
| first_indexed | 2024-12-22T04:27:06Z |
| format | Article |
| id | doaj.art-778eea2977ec43c59ec9f77266b9ba3d |
| institution | Directory Open Access Journal |
| issn | 2296-4185 |
| language | English |
| last_indexed | 2024-12-22T04:27:06Z |
| publishDate | 2015-03-01 |
| publisher | Frontiers Media S.A. |
| record_format | Article |
| series | Frontiers in Bioengineering and Biotechnology |
| spelling | doaj.art-778eea2977ec43c59ec9f77266b9ba3d2022-12-21T18:39:07ZengFrontiers Media S.A.Frontiers in Bioengineering and Biotechnology2296-41852015-03-01310.3389/fbioe.2015.00022130345Open-access metabolomics databases for natural product research: present capabilities and future potentialSean R Johnson0Bernd Markus Lange1Washington State UniversityWashington State UniversityVarious databases have been developed to aid in assigning structures to spectral peaks observed in metabolomics experiments. In this review article, we discuss the utility of currently available open-access spectral and chemical databases for natural products discovery. We also provide recommendations on how the research community can contribute to further improvementshttp://journal.frontiersin.org/Journal/10.3389/fbioe.2015.00022/fullMass SpectrometryMetabolomicshigh performance liquid chromatographynatural productSecondary metabolitegas chromatography |
| spellingShingle | Sean R Johnson Bernd Markus Lange Open-access metabolomics databases for natural product research: present capabilities and future potential Frontiers in Bioengineering and Biotechnology Mass Spectrometry Metabolomics high performance liquid chromatography natural product Secondary metabolite gas chromatography |
| title | Open-access metabolomics databases for natural product research: present capabilities and future potential |
| title_full | Open-access metabolomics databases for natural product research: present capabilities and future potential |
| title_fullStr | Open-access metabolomics databases for natural product research: present capabilities and future potential |
| title_full_unstemmed | Open-access metabolomics databases for natural product research: present capabilities and future potential |
| title_short | Open-access metabolomics databases for natural product research: present capabilities and future potential |
| title_sort | open access metabolomics databases for natural product research present capabilities and future potential |
| topic | Mass Spectrometry Metabolomics high performance liquid chromatography natural product Secondary metabolite gas chromatography |
| url | http://journal.frontiersin.org/Journal/10.3389/fbioe.2015.00022/full |
| work_keys_str_mv | AT seanrjohnson openaccessmetabolomicsdatabasesfornaturalproductresearchpresentcapabilitiesandfuturepotential AT berndmarkuslange openaccessmetabolomicsdatabasesfornaturalproductresearchpresentcapabilitiesandfuturepotential |