Telomere to Telomere Genome Assembly of Fusarium musae F31, Causal Agent of Crown Rot Disease of Banana
Fusarium musae causes crown rot of banana and it is also associated to clinical fusariosis. A chromosome-level genome assembly of F. musae F31 obtained combining Nanopore long reads and Illumina paired-end reads resulted in 12 chromosomes plus one contig with overall N50 of 4.36 Mb, and is presented...
| Main Authors: | , , , , , |
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| Format: | Article |
| Language: | English |
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The American Phytopathological Society
2021-12-01
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| Series: | Molecular Plant-Microbe Interactions |
| Subjects: | |
| Online Access: | https://apsjournals.apsnet.org/doi/10.1094/MPMI-05-21-0127-A |
| _version_ | 1818757269274230784 |
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| author | Luca Degradi Valeria Tava Andrea Kunova Paolo Cortesi Marco Saracchi Matias Pasquali |
| author_facet | Luca Degradi Valeria Tava Andrea Kunova Paolo Cortesi Marco Saracchi Matias Pasquali |
| author_sort | Luca Degradi |
| collection | DOAJ |
| description | Fusarium musae causes crown rot of banana and it is also associated to clinical fusariosis. A chromosome-level genome assembly of F. musae F31 obtained combining Nanopore long reads and Illumina paired-end reads resulted in 12 chromosomes plus one contig with overall N50 of 4.36 Mb, and is presented together with its mitochondrial genome (58,072 bp). The F31 genome includes telomeric regions for 11 of the 12 chromosomes representing one of the most complete genomes available in the Fusarium fujikuroi species complex. The high-quality assembly of the F31 genome will be a valuable resource for studying the pathogenic interactions occurring between F. musae and banana. Moreover, it represents an important resource for understanding the genome evolution in the F. fujikuroi species complex.[Graphic: see text] Copyright © 2021 The Author(s). This is an open access article distributed under the CC BY-NC-ND 4.0 International license. |
| first_indexed | 2024-12-18T06:08:15Z |
| format | Article |
| id | doaj.art-78484a3a289a4214a43c12577383ce5b |
| institution | Directory Open Access Journal |
| issn | 0894-0282 1943-7706 |
| language | English |
| last_indexed | 2024-12-18T06:08:15Z |
| publishDate | 2021-12-01 |
| publisher | The American Phytopathological Society |
| record_format | Article |
| series | Molecular Plant-Microbe Interactions |
| spelling | doaj.art-78484a3a289a4214a43c12577383ce5b2022-12-21T21:18:28ZengThe American Phytopathological SocietyMolecular Plant-Microbe Interactions0894-02821943-77062021-12-0134121455145710.1094/MPMI-05-21-0127-ATelomere to Telomere Genome Assembly of Fusarium musae F31, Causal Agent of Crown Rot Disease of BananaLuca Degradi0Valeria Tava1Andrea Kunova2Paolo Cortesi3Marco Saracchi4Matias Pasquali5Department of Food, Environmental and Nutritional Sciences, Università degli Studi di Milano, via Celoria 2, 20133 Milano, ItalyDepartment of Food, Environmental and Nutritional Sciences, Università degli Studi di Milano, via Celoria 2, 20133 Milano, ItalyDepartment of Food, Environmental and Nutritional Sciences, Università degli Studi di Milano, via Celoria 2, 20133 Milano, ItalyDepartment of Food, Environmental and Nutritional Sciences, Università degli Studi di Milano, via Celoria 2, 20133 Milano, ItalyDepartment of Food, Environmental and Nutritional Sciences, Università degli Studi di Milano, via Celoria 2, 20133 Milano, ItalyDepartment of Food, Environmental and Nutritional Sciences, Università degli Studi di Milano, via Celoria 2, 20133 Milano, ItalyFusarium musae causes crown rot of banana and it is also associated to clinical fusariosis. A chromosome-level genome assembly of F. musae F31 obtained combining Nanopore long reads and Illumina paired-end reads resulted in 12 chromosomes plus one contig with overall N50 of 4.36 Mb, and is presented together with its mitochondrial genome (58,072 bp). The F31 genome includes telomeric regions for 11 of the 12 chromosomes representing one of the most complete genomes available in the Fusarium fujikuroi species complex. The high-quality assembly of the F31 genome will be a valuable resource for studying the pathogenic interactions occurring between F. musae and banana. Moreover, it represents an important resource for understanding the genome evolution in the F. fujikuroi species complex.[Graphic: see text] Copyright © 2021 The Author(s). This is an open access article distributed under the CC BY-NC-ND 4.0 International license.https://apsjournals.apsnet.org/doi/10.1094/MPMI-05-21-0127-Across-kingdom pathogencrown rot diseasefungus–plant interactionsfusariosisFusarium fujikuroi species complexgenomics |
| spellingShingle | Luca Degradi Valeria Tava Andrea Kunova Paolo Cortesi Marco Saracchi Matias Pasquali Telomere to Telomere Genome Assembly of Fusarium musae F31, Causal Agent of Crown Rot Disease of Banana Molecular Plant-Microbe Interactions cross-kingdom pathogen crown rot disease fungus–plant interactions fusariosis Fusarium fujikuroi species complex genomics |
| title | Telomere to Telomere Genome Assembly of Fusarium musae F31, Causal Agent of Crown Rot Disease of Banana |
| title_full | Telomere to Telomere Genome Assembly of Fusarium musae F31, Causal Agent of Crown Rot Disease of Banana |
| title_fullStr | Telomere to Telomere Genome Assembly of Fusarium musae F31, Causal Agent of Crown Rot Disease of Banana |
| title_full_unstemmed | Telomere to Telomere Genome Assembly of Fusarium musae F31, Causal Agent of Crown Rot Disease of Banana |
| title_short | Telomere to Telomere Genome Assembly of Fusarium musae F31, Causal Agent of Crown Rot Disease of Banana |
| title_sort | telomere to telomere genome assembly of fusarium musae f31 causal agent of crown rot disease of banana |
| topic | cross-kingdom pathogen crown rot disease fungus–plant interactions fusariosis Fusarium fujikuroi species complex genomics |
| url | https://apsjournals.apsnet.org/doi/10.1094/MPMI-05-21-0127-A |
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