Application of nanopore adaptive sequencing in pathogen detection of a patient with Chlamydia psittaci infection

Application of nanopore adaptive sequencing in pathogen detection of a patient with Chlamydia psittaci infection

IntroductionNanopore sequencing has been widely used in clinical metagenomic sequencing for pathogen detection with high portability and real-time sequencing. Oxford Nanopore Technologies has recently launched an adaptive sequencing function, which can enrich on-target reads through real-time alignm...

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Bibliographic Details
Main Authors: Yanfeng Lin, Yan Dai, Shuang Zhang, Hao Guo, Lang Yang, Jinhui Li, Kaiying Wang, Ming Ni, Zongqian Hu, Leili Jia, Huiying Liu, Peng Li, Hongbin Song
Format: Article
Language:English
Published: Frontiers Media S.A. 2023-01-01
Series:Frontiers in Cellular and Infection Microbiology
Subjects:
nanopore adaptive sequencing
mNGS
pathogen detection
respiratory infection
Chlamydia psittaci
Online Access:https://www.frontiersin.org/articles/10.3389/fcimb.2023.1064317/full

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