Bioinformatics Modelling and Metabolic Engineering of the Branched Chain Amino Acid Pathway for Specific Production of Mycosubtilin Isoforms in <i>Bacillus subtilis</i>

Mycosubtilin belongs to the family of lipopeptides. Different isoforms with various antifungal activities can be obtained according to the length and the isomery of the fatty acid. In this work, the activities of the mycosubtilin isoforms were first studied against the pathogen <i>Aspergillus...

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Bibliographic Details
Main Authors: Jean-Sébastien Guez, Françoise Coucheney, Joany Guy, Max Béchet, Pierre Fontanille, Nour-Eddine Chihib, Joachim Niehren, François Coutte, Philippe Jacques
Format: Article
Language:English
Published: MDPI AG 2022-01-01
Series:Metabolites
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Online Access:https://www.mdpi.com/2218-1989/12/2/107
Description
Summary:Mycosubtilin belongs to the family of lipopeptides. Different isoforms with various antifungal activities can be obtained according to the length and the isomery of the fatty acid. In this work, the activities of the mycosubtilin isoforms were first studied against the pathogen <i>Aspergillus niger</i>, revealing the high activity of the <i>anteiso</i>-C17 isoform. Modification of the mycosubtilin isoform patterns during cultures of the natural strain <i>Bacillus subtilis</i> ATCC 6633 was then investigated through amino acid feeding experiments. In parallel, single-gene knockouts and single-gene overexpression, leading to the overproduction of the <i>anteiso</i>-C15 fatty acid chains, were predicted using informatics tools which provide logical reasoning with formal models of reaction networks. In this way, it was <i>in silico</i> predicted that the single overexpression of the <i>ilvA</i> gene as well as the single knockout of the <i>codY</i> gene may lead to the overproduction of <i>anteiso</i>-C15 fatty acid chains. For the first time, it has been demonstrated that overexpression of <i>ilvA</i> helps to enhance the furniture of odd <i>anteiso</i> fatty acids leading to a favored mycosubtilin <i>anteiso</i>-C17 production pattern (+41%). Alternatively, a knock-out <i>codY</i> mutant led to a higher furniture of even <i>iso</i> fatty acids, leading to a favored mycosubtilin <i>iso</i>-C16 production pattern (+180%). These results showed that increased selective synthesis of particular isoforms of mycosubtilin through metabolic engineering is feasible, disclosing the interest of these approaches for future development of lipopeptide-producing strains.
ISSN:2218-1989