The complete mitochondrial genome and phylogenetic analysis of Cancer magister (Decapoda, Cancridae)
The complete mitochondrial (mt) genome of Cancer magister was obtained using next-generation sequencing. The circular genome was 39,658 bp in length, consisting of 13 protein-coding genes, 26 transfer RNA genes, and 2 ribosomal RNA genes. Unfortunately, the control region was not found in mitochondr...
| Main Authors: | , , , , |
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| Format: | Article |
| Language: | English |
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Taylor & Francis Group
2019-07-01
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| Series: | Mitochondrial DNA. Part B. Resources |
| Subjects: | |
| Online Access: | http://dx.doi.org/10.1080/23802359.2019.1691474 |
| _version_ | 1797639570113691648 |
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| author | Sigang Fan Chao Zhao Pengfei Wang Lulu Yan Lihua Qiu |
| author_facet | Sigang Fan Chao Zhao Pengfei Wang Lulu Yan Lihua Qiu |
| author_sort | Sigang Fan |
| collection | DOAJ |
| description | The complete mitochondrial (mt) genome of Cancer magister was obtained using next-generation sequencing. The circular genome was 39,658 bp in length, consisting of 13 protein-coding genes, 26 transfer RNA genes, and 2 ribosomal RNA genes. Unfortunately, the control region was not found in mitochondrial genome. Of the 41 genes, 24 were encoded by the heavy strand, while the others were encoded by the light strand. The genome composition with A + T bias (69.90%). The phylogenetic analysis showed that C. magister and Cancer pagurus was clustered together, then grouped with A. alayseae and Gandalfus puia, which may suggest Cancroidea was close with Bythograeidae. The newly described mitochondrial genome may provide valuable data for phylogenetic analysis for Cancridae. |
| first_indexed | 2024-03-11T13:18:39Z |
| format | Article |
| id | doaj.art-79255634df9a4be9b8f448ddfc5009cb |
| institution | Directory Open Access Journal |
| issn | 2380-2359 |
| language | English |
| last_indexed | 2024-03-11T13:18:39Z |
| publishDate | 2019-07-01 |
| publisher | Taylor & Francis Group |
| record_format | Article |
| series | Mitochondrial DNA. Part B. Resources |
| spelling | doaj.art-79255634df9a4be9b8f448ddfc5009cb2023-11-03T10:38:52ZengTaylor & Francis GroupMitochondrial DNA. Part B. Resources2380-23592019-07-01424107410810.1080/23802359.2019.16914741691474The complete mitochondrial genome and phylogenetic analysis of Cancer magister (Decapoda, Cancridae)Sigang Fan0Chao Zhao1Pengfei Wang2Lulu Yan3Lihua Qiu4Ministry of Agriculture, South China Sea Fisheries Research Institute, Chinese Academy of Fishery SciencesMinistry of Agriculture, South China Sea Fisheries Research Institute, Chinese Academy of Fishery SciencesMinistry of Agriculture, South China Sea Fisheries Research Institute, Chinese Academy of Fishery SciencesMinistry of Agriculture, South China Sea Fisheries Research Institute, Chinese Academy of Fishery SciencesMinistry of Agriculture, South China Sea Fisheries Research Institute, Chinese Academy of Fishery SciencesThe complete mitochondrial (mt) genome of Cancer magister was obtained using next-generation sequencing. The circular genome was 39,658 bp in length, consisting of 13 protein-coding genes, 26 transfer RNA genes, and 2 ribosomal RNA genes. Unfortunately, the control region was not found in mitochondrial genome. Of the 41 genes, 24 were encoded by the heavy strand, while the others were encoded by the light strand. The genome composition with A + T bias (69.90%). The phylogenetic analysis showed that C. magister and Cancer pagurus was clustered together, then grouped with A. alayseae and Gandalfus puia, which may suggest Cancroidea was close with Bythograeidae. The newly described mitochondrial genome may provide valuable data for phylogenetic analysis for Cancridae.http://dx.doi.org/10.1080/23802359.2019.1691474cancer magistermitochondrial genomephylogeny |
| spellingShingle | Sigang Fan Chao Zhao Pengfei Wang Lulu Yan Lihua Qiu The complete mitochondrial genome and phylogenetic analysis of Cancer magister (Decapoda, Cancridae) Mitochondrial DNA. Part B. Resources cancer magister mitochondrial genome phylogeny |
| title | The complete mitochondrial genome and phylogenetic analysis of Cancer magister (Decapoda, Cancridae) |
| title_full | The complete mitochondrial genome and phylogenetic analysis of Cancer magister (Decapoda, Cancridae) |
| title_fullStr | The complete mitochondrial genome and phylogenetic analysis of Cancer magister (Decapoda, Cancridae) |
| title_full_unstemmed | The complete mitochondrial genome and phylogenetic analysis of Cancer magister (Decapoda, Cancridae) |
| title_short | The complete mitochondrial genome and phylogenetic analysis of Cancer magister (Decapoda, Cancridae) |
| title_sort | complete mitochondrial genome and phylogenetic analysis of cancer magister decapoda cancridae |
| topic | cancer magister mitochondrial genome phylogeny |
| url | http://dx.doi.org/10.1080/23802359.2019.1691474 |
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