The complete chloroplast genome and phylogenetic analysis of Acalypha hispida Burm. f. (Euphorbiaceae), an ornamental and medicinal plant
AbstractAcalypha hispida Burm. f. (1768) is an evergreen shrub native to New Guinea and the Bismarck Archipelago. Currently, it is widely cultivated as an ornamental and medicinal plant in tropical and subtropical areas worldwide. This study characterized the complete chloroplast genome of A. hispid...
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| Format: | Article |
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Taylor & Francis Group
2023-11-01
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| Series: | Mitochondrial DNA. Part B. Resources |
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| Online Access: | https://www.tandfonline.com/doi/10.1080/23802359.2023.2284414 |
| _version_ | 1797244424231583744 |
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| author | Yan Dong Changmei Du Jianhua Yue Wenyang Li |
| author_facet | Yan Dong Changmei Du Jianhua Yue Wenyang Li |
| author_sort | Yan Dong |
| collection | DOAJ |
| description | AbstractAcalypha hispida Burm. f. (1768) is an evergreen shrub native to New Guinea and the Bismarck Archipelago. Currently, it is widely cultivated as an ornamental and medicinal plant in tropical and subtropical areas worldwide. This study characterized the complete chloroplast genome of A. hispida, which is 172,122 bp in length and consists of large single-copy (LSC) and small single-copy (SSC) regions of 97,025 bp and 19,787 bp, respectively, that are separated by a pair of 27,655 bp inverted repeat (IR) regions. The overall GC content of the genome is 34.22%. The genome contains 131 genes, including 86 protein-coding, 37 tRNA, and eight rRNA genes. Phylogenetic analysis indicates that A. hispida is closely related to Ricinus communis and Cleidiocarpon cavaleriei in the Euphorbiaceae family. The complete chloroplast genome of A. hispida provides genomic resources and potential markers suitable for future species identification and speciation studies of the genus Acalypheae and will also provide important information on the phylogenetic relationships of the Euphorbiaceae family. |
| first_indexed | 2024-03-08T15:56:38Z |
| format | Article |
| id | doaj.art-794e666daf824ad18be54beb20c6a5fe |
| institution | Directory Open Access Journal |
| issn | 2380-2359 |
| language | English |
| last_indexed | 2024-04-24T19:10:47Z |
| publishDate | 2023-11-01 |
| publisher | Taylor & Francis Group |
| record_format | Article |
| series | Mitochondrial DNA. Part B. Resources |
| spelling | doaj.art-794e666daf824ad18be54beb20c6a5fe2024-03-26T11:04:23ZengTaylor & Francis GroupMitochondrial DNA. Part B. Resources2380-23592023-11-018111285128910.1080/23802359.2023.2284414The complete chloroplast genome and phylogenetic analysis of Acalypha hispida Burm. f. (Euphorbiaceae), an ornamental and medicinal plantYan Dong0Changmei Du1Jianhua Yue2Wenyang Li3School of Forestry, Xinyang Agriculture and Forestry University, Xinyang, Henan, PR ChinaSchool of Horticulture, Xinyang Agriculture and Forestry University, Xinyang, Henan, PR ChinaSchool of Horticulture, Xinyang Agriculture and Forestry University, Xinyang, Henan, PR ChinaSchool of Forestry, Xinyang Agriculture and Forestry University, Xinyang, Henan, PR ChinaAbstractAcalypha hispida Burm. f. (1768) is an evergreen shrub native to New Guinea and the Bismarck Archipelago. Currently, it is widely cultivated as an ornamental and medicinal plant in tropical and subtropical areas worldwide. This study characterized the complete chloroplast genome of A. hispida, which is 172,122 bp in length and consists of large single-copy (LSC) and small single-copy (SSC) regions of 97,025 bp and 19,787 bp, respectively, that are separated by a pair of 27,655 bp inverted repeat (IR) regions. The overall GC content of the genome is 34.22%. The genome contains 131 genes, including 86 protein-coding, 37 tRNA, and eight rRNA genes. Phylogenetic analysis indicates that A. hispida is closely related to Ricinus communis and Cleidiocarpon cavaleriei in the Euphorbiaceae family. The complete chloroplast genome of A. hispida provides genomic resources and potential markers suitable for future species identification and speciation studies of the genus Acalypheae and will also provide important information on the phylogenetic relationships of the Euphorbiaceae family.https://www.tandfonline.com/doi/10.1080/23802359.2023.2284414chloroplast genomeAcalypha hispida Burm. f.phylogenetic analysis |
| spellingShingle | Yan Dong Changmei Du Jianhua Yue Wenyang Li The complete chloroplast genome and phylogenetic analysis of Acalypha hispida Burm. f. (Euphorbiaceae), an ornamental and medicinal plant Mitochondrial DNA. Part B. Resources chloroplast genome Acalypha hispida Burm. f. phylogenetic analysis |
| title | The complete chloroplast genome and phylogenetic analysis of Acalypha hispida Burm. f. (Euphorbiaceae), an ornamental and medicinal plant |
| title_full | The complete chloroplast genome and phylogenetic analysis of Acalypha hispida Burm. f. (Euphorbiaceae), an ornamental and medicinal plant |
| title_fullStr | The complete chloroplast genome and phylogenetic analysis of Acalypha hispida Burm. f. (Euphorbiaceae), an ornamental and medicinal plant |
| title_full_unstemmed | The complete chloroplast genome and phylogenetic analysis of Acalypha hispida Burm. f. (Euphorbiaceae), an ornamental and medicinal plant |
| title_short | The complete chloroplast genome and phylogenetic analysis of Acalypha hispida Burm. f. (Euphorbiaceae), an ornamental and medicinal plant |
| title_sort | complete chloroplast genome and phylogenetic analysis of acalypha hispida burm f euphorbiaceae an ornamental and medicinal plant |
| topic | chloroplast genome Acalypha hispida Burm. f. phylogenetic analysis |
| url | https://www.tandfonline.com/doi/10.1080/23802359.2023.2284414 |
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