DeepTSS: multi-branch convolutional neural network for transcription start site identification from CAGE data

DeepTSS: multi-branch convolutional neural network for transcription start site identification from CAGE data

Abstract Background The widespread usage of Cap Analysis of Gene Expression (CAGE) has led to numerous breakthroughs in understanding the transcription mechanisms. Recent evidence in the literature, however, suggests that CAGE suffers from transcriptional and technical noise. Regardless of the sampl...

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Bibliographic Details
Main Authors: Dimitris Grigoriadis, Nikos Perdikopanis, Georgios K. Georgakilas, Artemis G. Hatzigeorgiou
Format: Article
Language:English
Published: BMC 2022-12-01
Series:BMC Bioinformatics
Subjects:
TSS
CAGE
Bioinformatics
Promoter
Transcription
Machine Learning
Online Access:https://doi.org/10.1186/s12859-022-04945-y

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