Characterization of the complete mitochondrial genome of Xanthid crab, Atergatis integerrimus from China (Decapoda: Brachyura) and its phylogenetic analysis
The complete mitochondrial genome sequence of Atergatis integerrimus from China has been amplified and sequenced in this study. The mitogenome assembly was found to be 15,924 bp in length with base composition of A (32.88%), G (10.58%), C (20.87%), T (35.66%), A + T (68.54%), and G + C (31.46%). It...
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| Format: | Article |
| Language: | English |
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Taylor & Francis Group
2018-01-01
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| Series: | Mitochondrial DNA. Part B. Resources |
| Subjects: | |
| Online Access: | http://dx.doi.org/10.1080/23802359.2018.1456374 |
| _version_ | 1797640691882393600 |
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| author | Zhuofang Xie Huaqiang Tan Fan Lin Mengyun Guan Khor Waiho Shaobin Fang Mhd Ikhwanuddin Hanafiah Fazhan Hongyu Ma |
| author_facet | Zhuofang Xie Huaqiang Tan Fan Lin Mengyun Guan Khor Waiho Shaobin Fang Mhd Ikhwanuddin Hanafiah Fazhan Hongyu Ma |
| author_sort | Zhuofang Xie |
| collection | DOAJ |
| description | The complete mitochondrial genome sequence of Atergatis integerrimus from China has been amplified and sequenced in this study. The mitogenome assembly was found to be 15,924 bp in length with base composition of A (32.88%), G (10.58%), C (20.87%), T (35.66%), A + T (68.54%), and G + C (31.46%). It contained 13 protein-coding genes, 22 transfer RNA genes, two ribosomal RNA genes and a control region. The phylogenetic position was constructed and the A. integerrimus was closely clustered with Pseudocarcinus gigas and Leptodius sanguineus. The complete mitochondrial genome sequence would be useful for further understanding the evolution of A. integerrimus. |
| first_indexed | 2024-03-11T13:35:26Z |
| format | Article |
| id | doaj.art-7a6163788a2d41dba33356e6c143ba9b |
| institution | Directory Open Access Journal |
| issn | 2380-2359 |
| language | English |
| last_indexed | 2024-03-11T13:35:26Z |
| publishDate | 2018-01-01 |
| publisher | Taylor & Francis Group |
| record_format | Article |
| series | Mitochondrial DNA. Part B. Resources |
| spelling | doaj.art-7a6163788a2d41dba33356e6c143ba9b2023-11-02T15:57:22ZengTaylor & Francis GroupMitochondrial DNA. Part B. Resources2380-23592018-01-013139739810.1080/23802359.2018.14563741456374Characterization of the complete mitochondrial genome of Xanthid crab, Atergatis integerrimus from China (Decapoda: Brachyura) and its phylogenetic analysisZhuofang Xie0Huaqiang Tan1Fan Lin2Mengyun Guan3Khor Waiho4Shaobin Fang5Mhd Ikhwanuddin6Hanafiah Fazhan7Hongyu Ma8Shantou UniversityShantou UniversityShantou UniversityShantou UniversityShantou UniversityShantou UniversityInstitute of Tropical Aquaculture, Universiti Malaysia TerengganuShantou UniversityShantou UniversityThe complete mitochondrial genome sequence of Atergatis integerrimus from China has been amplified and sequenced in this study. The mitogenome assembly was found to be 15,924 bp in length with base composition of A (32.88%), G (10.58%), C (20.87%), T (35.66%), A + T (68.54%), and G + C (31.46%). It contained 13 protein-coding genes, 22 transfer RNA genes, two ribosomal RNA genes and a control region. The phylogenetic position was constructed and the A. integerrimus was closely clustered with Pseudocarcinus gigas and Leptodius sanguineus. The complete mitochondrial genome sequence would be useful for further understanding the evolution of A. integerrimus.http://dx.doi.org/10.1080/23802359.2018.1456374xanthid crabatergatis integerrimusmitochondrial genomephylogenetic analysis |
| spellingShingle | Zhuofang Xie Huaqiang Tan Fan Lin Mengyun Guan Khor Waiho Shaobin Fang Mhd Ikhwanuddin Hanafiah Fazhan Hongyu Ma Characterization of the complete mitochondrial genome of Xanthid crab, Atergatis integerrimus from China (Decapoda: Brachyura) and its phylogenetic analysis Mitochondrial DNA. Part B. Resources xanthid crab atergatis integerrimus mitochondrial genome phylogenetic analysis |
| title | Characterization of the complete mitochondrial genome of Xanthid crab, Atergatis integerrimus from China (Decapoda: Brachyura) and its phylogenetic analysis |
| title_full | Characterization of the complete mitochondrial genome of Xanthid crab, Atergatis integerrimus from China (Decapoda: Brachyura) and its phylogenetic analysis |
| title_fullStr | Characterization of the complete mitochondrial genome of Xanthid crab, Atergatis integerrimus from China (Decapoda: Brachyura) and its phylogenetic analysis |
| title_full_unstemmed | Characterization of the complete mitochondrial genome of Xanthid crab, Atergatis integerrimus from China (Decapoda: Brachyura) and its phylogenetic analysis |
| title_short | Characterization of the complete mitochondrial genome of Xanthid crab, Atergatis integerrimus from China (Decapoda: Brachyura) and its phylogenetic analysis |
| title_sort | characterization of the complete mitochondrial genome of xanthid crab atergatis integerrimus from china decapoda brachyura and its phylogenetic analysis |
| topic | xanthid crab atergatis integerrimus mitochondrial genome phylogenetic analysis |
| url | http://dx.doi.org/10.1080/23802359.2018.1456374 |
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