Complete mitochondrial genome of Sinogastromyzon szechuanensis (Teleostei, Cypriniformes, Balitoridae) obtained using next-generation sequencing
The complete mitogenome sequence of Sinogastromyzon szechuanensis was obtained using next generation sequencing and confirmed via overlap-PCR method. The genome was 16,565 bp in length and consisted of 13 protein-coding genes (PCGs), 2 ribosomal RNA genes, 23 transfer RNA genes and 1 control region....
| Main Authors: | , , , , , , , |
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| Format: | Article |
| Language: | English |
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Taylor & Francis Group
2021-01-01
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| Series: | Mitochondrial DNA. Part B. Resources |
| Subjects: | |
| Online Access: | http://dx.doi.org/10.1080/23802359.2020.1846471 |
| _version_ | 1797639011453370368 |
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| author | Wei Li Xiaggojiang Chen Mengmeng Zheng Yin Wang Xingchen Zhou Haiyang Li Guolong Zhou Bichun Li |
| author_facet | Wei Li Xiaggojiang Chen Mengmeng Zheng Yin Wang Xingchen Zhou Haiyang Li Guolong Zhou Bichun Li |
| author_sort | Wei Li |
| collection | DOAJ |
| description | The complete mitogenome sequence of Sinogastromyzon szechuanensis was obtained using next generation sequencing and confirmed via overlap-PCR method. The genome was 16,565 bp in length and consisted of 13 protein-coding genes (PCGs), 2 ribosomal RNA genes, 23 transfer RNA genes and 1 control region. The overall nucleotide composition of heavy strand was 30.38% A (5033), 16.62% G (2753), 25.25% T (4182) and 27.75 (4597), with a slight A–T skew (55.63%), which is most obvious in the D-loop and most transfer RNA genes. Mitochondrial genome analyses based on ML analyses yielded identical phylogenetic trees. |
| first_indexed | 2024-03-11T13:11:42Z |
| format | Article |
| id | doaj.art-7acd9d4f683e44198596699da8495f95 |
| institution | Directory Open Access Journal |
| issn | 2380-2359 |
| language | English |
| last_indexed | 2024-03-11T13:11:42Z |
| publishDate | 2021-01-01 |
| publisher | Taylor & Francis Group |
| record_format | Article |
| series | Mitochondrial DNA. Part B. Resources |
| spelling | doaj.art-7acd9d4f683e44198596699da8495f952023-11-03T14:08:17ZengTaylor & Francis GroupMitochondrial DNA. Part B. Resources2380-23592021-01-0161697010.1080/23802359.2020.18464711846471Complete mitochondrial genome of Sinogastromyzon szechuanensis (Teleostei, Cypriniformes, Balitoridae) obtained using next-generation sequencingWei Li0Xiaggojiang Chen1Mengmeng Zheng2Yin Wang3Xingchen Zhou4Haiyang Li5Guolong Zhou6Bichun Li7College of Animal Science and Technology, Yangzhou UniversityDepartment of Fishery Sciences and Technology, Jiangsu Agri-animal Husbandry Vocational CollegeJiangyan County Agricultural and Rural BureauDepartment of Fishery Sciences and Technology, Jiangsu Agri-animal Husbandry Vocational CollegeDepartment of Fishery Sciences and Technology, Jiangsu Agri-animal Husbandry Vocational CollegeDepartment of Fishery Sciences and Technology, Jiangsu Agri-animal Husbandry Vocational CollegeDepartment of Fishery Sciences and Technology, Jiangsu Agri-animal Husbandry Vocational CollegeCollege of Animal Science and Technology, Yangzhou UniversityThe complete mitogenome sequence of Sinogastromyzon szechuanensis was obtained using next generation sequencing and confirmed via overlap-PCR method. The genome was 16,565 bp in length and consisted of 13 protein-coding genes (PCGs), 2 ribosomal RNA genes, 23 transfer RNA genes and 1 control region. The overall nucleotide composition of heavy strand was 30.38% A (5033), 16.62% G (2753), 25.25% T (4182) and 27.75 (4597), with a slight A–T skew (55.63%), which is most obvious in the D-loop and most transfer RNA genes. Mitochondrial genome analyses based on ML analyses yielded identical phylogenetic trees.http://dx.doi.org/10.1080/23802359.2020.1846471mitochondrial genomesinogastromyzon szechuanensisnext-generation sequencing |
| spellingShingle | Wei Li Xiaggojiang Chen Mengmeng Zheng Yin Wang Xingchen Zhou Haiyang Li Guolong Zhou Bichun Li Complete mitochondrial genome of Sinogastromyzon szechuanensis (Teleostei, Cypriniformes, Balitoridae) obtained using next-generation sequencing Mitochondrial DNA. Part B. Resources mitochondrial genome sinogastromyzon szechuanensis next-generation sequencing |
| title | Complete mitochondrial genome of Sinogastromyzon szechuanensis (Teleostei, Cypriniformes, Balitoridae) obtained using next-generation sequencing |
| title_full | Complete mitochondrial genome of Sinogastromyzon szechuanensis (Teleostei, Cypriniformes, Balitoridae) obtained using next-generation sequencing |
| title_fullStr | Complete mitochondrial genome of Sinogastromyzon szechuanensis (Teleostei, Cypriniformes, Balitoridae) obtained using next-generation sequencing |
| title_full_unstemmed | Complete mitochondrial genome of Sinogastromyzon szechuanensis (Teleostei, Cypriniformes, Balitoridae) obtained using next-generation sequencing |
| title_short | Complete mitochondrial genome of Sinogastromyzon szechuanensis (Teleostei, Cypriniformes, Balitoridae) obtained using next-generation sequencing |
| title_sort | complete mitochondrial genome of sinogastromyzon szechuanensis teleostei cypriniformes balitoridae obtained using next generation sequencing |
| topic | mitochondrial genome sinogastromyzon szechuanensis next-generation sequencing |
| url | http://dx.doi.org/10.1080/23802359.2020.1846471 |
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