Multi-Omics-Based Discovery of Plant Signaling Molecules

Plants produce numerous structurally and functionally diverse signaling metabolites, yet only relatively small fractions of which have been discovered. Multi-omics has greatly expedited the discovery as evidenced by increasing recent works reporting new plant signaling molecules and relevant functio...

Full description

Bibliographic Details
Main Authors: Fei Luo, Zongjun Yu, Qian Zhou, Ancheng Huang
Format: Article
Language:English
Published: MDPI AG 2022-01-01
Series:Metabolites
Subjects:
Online Access:https://www.mdpi.com/2218-1989/12/1/76
_version_ 1797492031247876096
author Fei Luo
Zongjun Yu
Qian Zhou
Ancheng Huang
author_facet Fei Luo
Zongjun Yu
Qian Zhou
Ancheng Huang
author_sort Fei Luo
collection DOAJ
description Plants produce numerous structurally and functionally diverse signaling metabolites, yet only relatively small fractions of which have been discovered. Multi-omics has greatly expedited the discovery as evidenced by increasing recent works reporting new plant signaling molecules and relevant functions via integrated multi-omics techniques. The effective application of multi-omics tools is the key to uncovering unknown plant signaling molecules. This review covers the features of multi-omics in the context of plant signaling metabolite discovery, highlighting how multi-omics addresses relevant aspects of the challenges as follows: (a) unknown functions of known metabolites; (b) unknown metabolites with known functions; (c) unknown metabolites and unknown functions. Based on the problem-oriented overview of the theoretical and application aspects of multi-omics, current limitations and future development of multi-omics in discovering plant signaling metabolites are also discussed.
first_indexed 2024-03-10T00:57:45Z
format Article
id doaj.art-7b076921a4c44ae988cc253d8a3413c0
institution Directory Open Access Journal
issn 2218-1989
language English
last_indexed 2024-03-10T00:57:45Z
publishDate 2022-01-01
publisher MDPI AG
record_format Article
series Metabolites
spelling doaj.art-7b076921a4c44ae988cc253d8a3413c02023-11-23T14:40:37ZengMDPI AGMetabolites2218-19892022-01-011217610.3390/metabo12010076Multi-Omics-Based Discovery of Plant Signaling MoleculesFei Luo0Zongjun Yu1Qian Zhou2Ancheng Huang3Key Laboratory of Molecular Design for Plant Cell Factory of Guangdong Higher Education Institutes, SUSTech-PKU Institute of Plant and Food Science, Department of Biology, School of Life Sciences, Southern University of Science and Technology, Shenzhen 518055, ChinaKey Laboratory of Molecular Design for Plant Cell Factory of Guangdong Higher Education Institutes, SUSTech-PKU Institute of Plant and Food Science, Department of Biology, School of Life Sciences, Southern University of Science and Technology, Shenzhen 518055, ChinaKey Laboratory of Molecular Design for Plant Cell Factory of Guangdong Higher Education Institutes, SUSTech-PKU Institute of Plant and Food Science, Department of Biology, School of Life Sciences, Southern University of Science and Technology, Shenzhen 518055, ChinaKey Laboratory of Molecular Design for Plant Cell Factory of Guangdong Higher Education Institutes, SUSTech-PKU Institute of Plant and Food Science, Department of Biology, School of Life Sciences, Southern University of Science and Technology, Shenzhen 518055, ChinaPlants produce numerous structurally and functionally diverse signaling metabolites, yet only relatively small fractions of which have been discovered. Multi-omics has greatly expedited the discovery as evidenced by increasing recent works reporting new plant signaling molecules and relevant functions via integrated multi-omics techniques. The effective application of multi-omics tools is the key to uncovering unknown plant signaling molecules. This review covers the features of multi-omics in the context of plant signaling metabolite discovery, highlighting how multi-omics addresses relevant aspects of the challenges as follows: (a) unknown functions of known metabolites; (b) unknown metabolites with known functions; (c) unknown metabolites and unknown functions. Based on the problem-oriented overview of the theoretical and application aspects of multi-omics, current limitations and future development of multi-omics in discovering plant signaling metabolites are also discussed.https://www.mdpi.com/2218-1989/12/1/76plant signaling moleculesmulti-omicssecondary metabolitesstructures and functions
spellingShingle Fei Luo
Zongjun Yu
Qian Zhou
Ancheng Huang
Multi-Omics-Based Discovery of Plant Signaling Molecules
Metabolites
plant signaling molecules
multi-omics
secondary metabolites
structures and functions
title Multi-Omics-Based Discovery of Plant Signaling Molecules
title_full Multi-Omics-Based Discovery of Plant Signaling Molecules
title_fullStr Multi-Omics-Based Discovery of Plant Signaling Molecules
title_full_unstemmed Multi-Omics-Based Discovery of Plant Signaling Molecules
title_short Multi-Omics-Based Discovery of Plant Signaling Molecules
title_sort multi omics based discovery of plant signaling molecules
topic plant signaling molecules
multi-omics
secondary metabolites
structures and functions
url https://www.mdpi.com/2218-1989/12/1/76
work_keys_str_mv AT feiluo multiomicsbaseddiscoveryofplantsignalingmolecules
AT zongjunyu multiomicsbaseddiscoveryofplantsignalingmolecules
AT qianzhou multiomicsbaseddiscoveryofplantsignalingmolecules
AT anchenghuang multiomicsbaseddiscoveryofplantsignalingmolecules