Deleterious <i>AGXT</i> Missense Variant Associated with Type 1 Primary Hyperoxaluria (PH1) in Zwartbles Sheep

Severe oxalate nephropathy has been previously reported in sheep and is mostly associated with excessive oxalate in the diet. However, a rare native Dutch breed (Zwartbles) seems to be predisposed to an inherited juvenile form of primary hyperoxaluria and no causative genetic variant has been descri...

Full description

Bibliographic Details
Main Authors: Anna Letko, Reinie Dijkman, Ben Strugnell, Irene M. Häfliger, Julia M. Paris, Katrina Henderson, Tim Geraghty, Hannah Orr, Sandra Scholes, Cord Drögemüller
Format: Article
Language:English
Published: MDPI AG 2020-09-01
Series:Genes
Subjects:
Online Access:https://www.mdpi.com/2073-4425/11/10/1147
_version_ 1797552289203879936
author Anna Letko
Reinie Dijkman
Ben Strugnell
Irene M. Häfliger
Julia M. Paris
Katrina Henderson
Tim Geraghty
Hannah Orr
Sandra Scholes
Cord Drögemüller
author_facet Anna Letko
Reinie Dijkman
Ben Strugnell
Irene M. Häfliger
Julia M. Paris
Katrina Henderson
Tim Geraghty
Hannah Orr
Sandra Scholes
Cord Drögemüller
author_sort Anna Letko
collection DOAJ
description Severe oxalate nephropathy has been previously reported in sheep and is mostly associated with excessive oxalate in the diet. However, a rare native Dutch breed (Zwartbles) seems to be predisposed to an inherited juvenile form of primary hyperoxaluria and no causative genetic variant has been described so far. This study aims to characterize the phenotype and genetic etiology of the inherited metabolic disease observed in several purebred Zwartbles sheep. Affected animals present with a wide range of clinical signs including condition loss, inappetence, malaise, and, occasionally, respiratory signs, as well as an apparent sudden unexpected death. Histopathology revealed widespread oxalate crystal deposition in kidneys of the cases. Whole-genome sequencing of two affected sheep identified a missense variant in the ovine <i>AGXT</i> gene (c.584G>A; p.Cys195Tyr). Variants in <i>AGXT</i> are known to cause type I primary hyperoxaluria in dogs and humans. Herein, we present evidence that the observed clinicopathological phenotype can be described as a form of ovine type I primary hyperoxaluria. This disorder is explained by a breed-specific recessively inherited pathogenic <i>AGXT</i> variant. Genetic testing enables selection against this fatal disorder in Zwartbles sheep as well as more precise diagnosis in animals with similar clinical phenotype. Our results have been incorporated in the Online Mendelian Inheritance in Animals (OMIA) database (OMIA 001672-9940).
first_indexed 2024-03-10T15:58:53Z
format Article
id doaj.art-7c41a797b13e431e83a9a008413720a1
institution Directory Open Access Journal
issn 2073-4425
language English
last_indexed 2024-03-10T15:58:53Z
publishDate 2020-09-01
publisher MDPI AG
record_format Article
series Genes
spelling doaj.art-7c41a797b13e431e83a9a008413720a12023-11-20T15:29:05ZengMDPI AGGenes2073-44252020-09-011110114710.3390/genes11101147Deleterious <i>AGXT</i> Missense Variant Associated with Type 1 Primary Hyperoxaluria (PH1) in Zwartbles SheepAnna Letko0Reinie Dijkman1Ben Strugnell2Irene M. Häfliger3Julia M. Paris4Katrina Henderson5Tim Geraghty6Hannah Orr7Sandra Scholes8Cord Drögemüller9Institute of Genetics, Vetsuisse Faculty, University of Bern, 3012 Bern, SwitzerlandRoyal GD, Postbus 9, 7400 AA Deventer, The NetherlandsFarm Post Mortems Ltd., Hamsterley, Bishop Auckland, County Durham DL13 3QF, UKInstitute of Genetics, Vetsuisse Faculty, University of Bern, 3012 Bern, SwitzerlandInstitute of Genetics, Vetsuisse Faculty, University of Bern, 3012 Bern, SwitzerlandSRUC Consulting Veterinary Services, Pentlands Science Park, Bush Estate Loan, Penicuik, Midlothian EH26 0PZ, UKSRUC Consulting Veterinary Services, Pentlands Science Park, Bush Estate Loan, Penicuik, Midlothian EH26 0PZ, UKSRUC Consulting Veterinary Services, Pentlands Science Park, Bush Estate Loan, Penicuik, Midlothian EH26 0PZ, UKSRUC Consulting Veterinary Services, Pentlands Science Park, Bush Estate Loan, Penicuik, Midlothian EH26 0PZ, UKInstitute of Genetics, Vetsuisse Faculty, University of Bern, 3012 Bern, SwitzerlandSevere oxalate nephropathy has been previously reported in sheep and is mostly associated with excessive oxalate in the diet. However, a rare native Dutch breed (Zwartbles) seems to be predisposed to an inherited juvenile form of primary hyperoxaluria and no causative genetic variant has been described so far. This study aims to characterize the phenotype and genetic etiology of the inherited metabolic disease observed in several purebred Zwartbles sheep. Affected animals present with a wide range of clinical signs including condition loss, inappetence, malaise, and, occasionally, respiratory signs, as well as an apparent sudden unexpected death. Histopathology revealed widespread oxalate crystal deposition in kidneys of the cases. Whole-genome sequencing of two affected sheep identified a missense variant in the ovine <i>AGXT</i> gene (c.584G>A; p.Cys195Tyr). Variants in <i>AGXT</i> are known to cause type I primary hyperoxaluria in dogs and humans. Herein, we present evidence that the observed clinicopathological phenotype can be described as a form of ovine type I primary hyperoxaluria. This disorder is explained by a breed-specific recessively inherited pathogenic <i>AGXT</i> variant. Genetic testing enables selection against this fatal disorder in Zwartbles sheep as well as more precise diagnosis in animals with similar clinical phenotype. Our results have been incorporated in the Online Mendelian Inheritance in Animals (OMIA) database (OMIA 001672-9940).https://www.mdpi.com/2073-4425/11/10/1147<i>Ovis aries</i>oxalate nephropathywhole-genome sequencingmetabolic diseaseprecision medicinegenetic test
spellingShingle Anna Letko
Reinie Dijkman
Ben Strugnell
Irene M. Häfliger
Julia M. Paris
Katrina Henderson
Tim Geraghty
Hannah Orr
Sandra Scholes
Cord Drögemüller
Deleterious <i>AGXT</i> Missense Variant Associated with Type 1 Primary Hyperoxaluria (PH1) in Zwartbles Sheep
Genes
<i>Ovis aries</i>
oxalate nephropathy
whole-genome sequencing
metabolic disease
precision medicine
genetic test
title Deleterious <i>AGXT</i> Missense Variant Associated with Type 1 Primary Hyperoxaluria (PH1) in Zwartbles Sheep
title_full Deleterious <i>AGXT</i> Missense Variant Associated with Type 1 Primary Hyperoxaluria (PH1) in Zwartbles Sheep
title_fullStr Deleterious <i>AGXT</i> Missense Variant Associated with Type 1 Primary Hyperoxaluria (PH1) in Zwartbles Sheep
title_full_unstemmed Deleterious <i>AGXT</i> Missense Variant Associated with Type 1 Primary Hyperoxaluria (PH1) in Zwartbles Sheep
title_short Deleterious <i>AGXT</i> Missense Variant Associated with Type 1 Primary Hyperoxaluria (PH1) in Zwartbles Sheep
title_sort deleterious i agxt i missense variant associated with type 1 primary hyperoxaluria ph1 in zwartbles sheep
topic <i>Ovis aries</i>
oxalate nephropathy
whole-genome sequencing
metabolic disease
precision medicine
genetic test
url https://www.mdpi.com/2073-4425/11/10/1147
work_keys_str_mv AT annaletko deleteriousiagxtimissensevariantassociatedwithtype1primaryhyperoxaluriaph1inzwartblessheep
AT reiniedijkman deleteriousiagxtimissensevariantassociatedwithtype1primaryhyperoxaluriaph1inzwartblessheep
AT benstrugnell deleteriousiagxtimissensevariantassociatedwithtype1primaryhyperoxaluriaph1inzwartblessheep
AT irenemhafliger deleteriousiagxtimissensevariantassociatedwithtype1primaryhyperoxaluriaph1inzwartblessheep
AT juliamparis deleteriousiagxtimissensevariantassociatedwithtype1primaryhyperoxaluriaph1inzwartblessheep
AT katrinahenderson deleteriousiagxtimissensevariantassociatedwithtype1primaryhyperoxaluriaph1inzwartblessheep
AT timgeraghty deleteriousiagxtimissensevariantassociatedwithtype1primaryhyperoxaluriaph1inzwartblessheep
AT hannahorr deleteriousiagxtimissensevariantassociatedwithtype1primaryhyperoxaluriaph1inzwartblessheep
AT sandrascholes deleteriousiagxtimissensevariantassociatedwithtype1primaryhyperoxaluriaph1inzwartblessheep
AT corddrogemuller deleteriousiagxtimissensevariantassociatedwithtype1primaryhyperoxaluriaph1inzwartblessheep