Natura 2000 Grassland Habitats Mapping Based on Spectro-Temporal Dimension of Sentinel-2 Images with Machine Learning

Habitat mapping is essential for the management and monitoring of Natura 2000 sites. Time-consuming field surveys are still the most frequently used solution for the implementation of the European Habitats Directive, but the use of remote sensing tools for this is becoming more common. The high temp...

Full description

Bibliographic Details
Main Authors: Adriana Marcinkowska-Ochtyra, Adrian Ochtyra, Edwin Raczko, Dominik Kopeć
Format: Article
Language:English
Published: MDPI AG 2023-03-01
Series:Remote Sensing
Subjects:
Online Access:https://www.mdpi.com/2072-4292/15/5/1388
_version_ 1797614447889481728
author Adriana Marcinkowska-Ochtyra
Adrian Ochtyra
Edwin Raczko
Dominik Kopeć
author_facet Adriana Marcinkowska-Ochtyra
Adrian Ochtyra
Edwin Raczko
Dominik Kopeć
author_sort Adriana Marcinkowska-Ochtyra
collection DOAJ
description Habitat mapping is essential for the management and monitoring of Natura 2000 sites. Time-consuming field surveys are still the most frequently used solution for the implementation of the European Habitats Directive, but the use of remote sensing tools for this is becoming more common. The high temporal resolution of Sentinel-2 data, registering the visible, near, and shortwave infrared ranges of the electromagnetic spectrum, makes them valuable material in this context. In this study, we aimed to use multitemporal Sentinel-2 data for mapping three grassland Natura 2000 habitats in Poland. We performed the classification based on spectro-temporal features extracted from data collected from eight different terms within the year 2017 using Convolutional Neural Networks (CNNs), and we also tested other widely used machine learning algorithms for comparison, such as Random Forests (RFs) and Support Vector Machines (SVMs). Based on ground truth data, we randomly selected training and validation polygons and then performed the evaluation iteratively (100 times). The best resulting median F1 accuracies that we obtained for habitats were as follows: 6210, 0.85; 6410, 0.80; and 6510, 0.84 (with SVM). Finally, we concluded that the accuracy of the results was comparable, but we obtained the best results using SVM (median OA = 88%, with 86% for RF and 84% for CNNs). In this work, we confirmed the usefulness of the spectral dimension of Sentinel-2 time series data for mapping grassland habitats, and researchers of future work can further develop the use of CNNs for this purpose.
first_indexed 2024-03-11T07:11:29Z
format Article
id doaj.art-7d0a11d6066245bd9de77bb28da42cc1
institution Directory Open Access Journal
issn 2072-4292
language English
last_indexed 2024-03-11T07:11:29Z
publishDate 2023-03-01
publisher MDPI AG
record_format Article
series Remote Sensing
spelling doaj.art-7d0a11d6066245bd9de77bb28da42cc12023-11-17T08:32:25ZengMDPI AGRemote Sensing2072-42922023-03-01155138810.3390/rs15051388Natura 2000 Grassland Habitats Mapping Based on Spectro-Temporal Dimension of Sentinel-2 Images with Machine LearningAdriana Marcinkowska-Ochtyra0Adrian Ochtyra1Edwin Raczko2Dominik Kopeć3Department of Geoinformatics, Cartography and Remote Sensing, Chair of Geomatics and Information Systems, Faculty of Geography and Regional Studies, University of Warsaw, 00-927 Warsaw, PolandDepartment of Geoinformatics, Cartography and Remote Sensing, Chair of Geomatics and Information Systems, Faculty of Geography and Regional Studies, University of Warsaw, 00-927 Warsaw, PolandDepartment of Geoinformatics, Cartography and Remote Sensing, Chair of Geomatics and Information Systems, Faculty of Geography and Regional Studies, University of Warsaw, 00-927 Warsaw, PolandMGGP Aero Sp. z o.o., 33-100 Tarnów, PolandHabitat mapping is essential for the management and monitoring of Natura 2000 sites. Time-consuming field surveys are still the most frequently used solution for the implementation of the European Habitats Directive, but the use of remote sensing tools for this is becoming more common. The high temporal resolution of Sentinel-2 data, registering the visible, near, and shortwave infrared ranges of the electromagnetic spectrum, makes them valuable material in this context. In this study, we aimed to use multitemporal Sentinel-2 data for mapping three grassland Natura 2000 habitats in Poland. We performed the classification based on spectro-temporal features extracted from data collected from eight different terms within the year 2017 using Convolutional Neural Networks (CNNs), and we also tested other widely used machine learning algorithms for comparison, such as Random Forests (RFs) and Support Vector Machines (SVMs). Based on ground truth data, we randomly selected training and validation polygons and then performed the evaluation iteratively (100 times). The best resulting median F1 accuracies that we obtained for habitats were as follows: 6210, 0.85; 6410, 0.80; and 6510, 0.84 (with SVM). Finally, we concluded that the accuracy of the results was comparable, but we obtained the best results using SVM (median OA = 88%, with 86% for RF and 84% for CNNs). In this work, we confirmed the usefulness of the spectral dimension of Sentinel-2 time series data for mapping grassland habitats, and researchers of future work can further develop the use of CNNs for this purpose.https://www.mdpi.com/2072-4292/15/5/1388grassland habitatmappingtime seriesmeadowsphenologyCNNs
spellingShingle Adriana Marcinkowska-Ochtyra
Adrian Ochtyra
Edwin Raczko
Dominik Kopeć
Natura 2000 Grassland Habitats Mapping Based on Spectro-Temporal Dimension of Sentinel-2 Images with Machine Learning
Remote Sensing
grassland habitat
mapping
time series
meadows
phenology
CNNs
title Natura 2000 Grassland Habitats Mapping Based on Spectro-Temporal Dimension of Sentinel-2 Images with Machine Learning
title_full Natura 2000 Grassland Habitats Mapping Based on Spectro-Temporal Dimension of Sentinel-2 Images with Machine Learning
title_fullStr Natura 2000 Grassland Habitats Mapping Based on Spectro-Temporal Dimension of Sentinel-2 Images with Machine Learning
title_full_unstemmed Natura 2000 Grassland Habitats Mapping Based on Spectro-Temporal Dimension of Sentinel-2 Images with Machine Learning
title_short Natura 2000 Grassland Habitats Mapping Based on Spectro-Temporal Dimension of Sentinel-2 Images with Machine Learning
title_sort natura 2000 grassland habitats mapping based on spectro temporal dimension of sentinel 2 images with machine learning
topic grassland habitat
mapping
time series
meadows
phenology
CNNs
url https://www.mdpi.com/2072-4292/15/5/1388
work_keys_str_mv AT adrianamarcinkowskaochtyra natura2000grasslandhabitatsmappingbasedonspectrotemporaldimensionofsentinel2imageswithmachinelearning
AT adrianochtyra natura2000grasslandhabitatsmappingbasedonspectrotemporaldimensionofsentinel2imageswithmachinelearning
AT edwinraczko natura2000grasslandhabitatsmappingbasedonspectrotemporaldimensionofsentinel2imageswithmachinelearning
AT dominikkopec natura2000grasslandhabitatsmappingbasedonspectrotemporaldimensionofsentinel2imageswithmachinelearning