Complete mitochondrial DNA sequence of the three-keeled pond turtle Mauremys reevesii (Reptilia: Testudines)
The complete mitochondrial genome of the three-keeled pond turtle Mauremys reevesii from Japan was analyzed using next-generation sequencing. The mitochondrial genome of M. reevesii was observed to be a circular molecule of 15,528 bp containing 13 protein-coding genes, 22 tRNA genes, and two rRNA ge...
| Main Authors: | , , |
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| Format: | Article |
| Language: | English |
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Taylor & Francis Group
2019-01-01
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| Series: | Mitochondrial DNA. Part B. Resources |
| Subjects: | |
| Online Access: | http://dx.doi.org/10.1080/23802359.2019.1601511 |
| _version_ | 1797639861546516480 |
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| author | Mari Asami Hisashi Okuyama Jun-ichi Takahashi |
| author_facet | Mari Asami Hisashi Okuyama Jun-ichi Takahashi |
| author_sort | Mari Asami |
| collection | DOAJ |
| description | The complete mitochondrial genome of the three-keeled pond turtle Mauremys reevesii from Japan was analyzed using next-generation sequencing. The mitochondrial genome of M. reevesii was observed to be a circular molecule of 15,528 bp containing 13 protein-coding genes, 22 tRNA genes, and two rRNA genes, along with one A + T-rich control region. The average AT was found to be 61.11%. One extra base was present at the 174th position in the ND3 gene. Molecular phylogenetic analysis revealed that M. reevesii from Japan was few genetically distant from the geographically isolated M. reevesii from South Korea. This turtle might have been exported to Japan from the Korean Peninsula after the Middle Ages. |
| first_indexed | 2024-03-11T13:23:38Z |
| format | Article |
| id | doaj.art-7de585fd2c4348b595e5ccd3a76e0182 |
| institution | Directory Open Access Journal |
| issn | 2380-2359 |
| language | English |
| last_indexed | 2024-03-11T13:23:38Z |
| publishDate | 2019-01-01 |
| publisher | Taylor & Francis Group |
| record_format | Article |
| series | Mitochondrial DNA. Part B. Resources |
| spelling | doaj.art-7de585fd2c4348b595e5ccd3a76e01822023-11-03T10:06:44ZengTaylor & Francis GroupMitochondrial DNA. Part B. Resources2380-23592019-01-01411520152110.1080/23802359.2019.16015111601511Complete mitochondrial DNA sequence of the three-keeled pond turtle Mauremys reevesii (Reptilia: Testudines)Mari Asami0Hisashi Okuyama1Jun-ichi Takahashi2Kyoto Sangyo UniversityKyoto Sangyo UniversityKyoto Sangyo UniversityThe complete mitochondrial genome of the three-keeled pond turtle Mauremys reevesii from Japan was analyzed using next-generation sequencing. The mitochondrial genome of M. reevesii was observed to be a circular molecule of 15,528 bp containing 13 protein-coding genes, 22 tRNA genes, and two rRNA genes, along with one A + T-rich control region. The average AT was found to be 61.11%. One extra base was present at the 174th position in the ND3 gene. Molecular phylogenetic analysis revealed that M. reevesii from Japan was few genetically distant from the geographically isolated M. reevesii from South Korea. This turtle might have been exported to Japan from the Korean Peninsula after the Middle Ages.http://dx.doi.org/10.1080/23802359.2019.1601511three-keeled pond turtlereeve’s pond turtlealien speciesnext-generation sequencingextra base |
| spellingShingle | Mari Asami Hisashi Okuyama Jun-ichi Takahashi Complete mitochondrial DNA sequence of the three-keeled pond turtle Mauremys reevesii (Reptilia: Testudines) Mitochondrial DNA. Part B. Resources three-keeled pond turtle reeve’s pond turtle alien species next-generation sequencing extra base |
| title | Complete mitochondrial DNA sequence of the three-keeled pond turtle Mauremys reevesii (Reptilia: Testudines) |
| title_full | Complete mitochondrial DNA sequence of the three-keeled pond turtle Mauremys reevesii (Reptilia: Testudines) |
| title_fullStr | Complete mitochondrial DNA sequence of the three-keeled pond turtle Mauremys reevesii (Reptilia: Testudines) |
| title_full_unstemmed | Complete mitochondrial DNA sequence of the three-keeled pond turtle Mauremys reevesii (Reptilia: Testudines) |
| title_short | Complete mitochondrial DNA sequence of the three-keeled pond turtle Mauremys reevesii (Reptilia: Testudines) |
| title_sort | complete mitochondrial dna sequence of the three keeled pond turtle mauremys reevesii reptilia testudines |
| topic | three-keeled pond turtle reeve’s pond turtle alien species next-generation sequencing extra base |
| url | http://dx.doi.org/10.1080/23802359.2019.1601511 |
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