The complete chloroplast genome sequence of Psittacanthus schiedeanus (Cham. & Schltdl.) G.Don. (Santalales: Loranthaceae), the first plastome of a mistletoe species in the Psittacantheae tribe
AbstractPsittacanthus schiedeanus (Cham. & Schltdl.) G.Don., 1834, is a mistletoe species in the Loranthaceae, characteristic of the canopy in cloud forest edges and widely distributed in northern Mesoamerica. Here, we report the complete chloroplast genome sequence of P. schiedeanus, the first...
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| Format: | Article |
| Language: | English |
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Taylor & Francis Group
2024-01-01
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| Series: | Mitochondrial DNA. Part B. Resources |
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| Online Access: | https://www.tandfonline.com/doi/10.1080/23802359.2023.2298078 |
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| author | Saddan Morales-Saldaña Emanuel Villafán Antonio Acini Vásquez-Aguilar Santiago Ramírez-Barahona Enrique Ibarra-Laclette Juan Francisco Ornelas |
| author_facet | Saddan Morales-Saldaña Emanuel Villafán Antonio Acini Vásquez-Aguilar Santiago Ramírez-Barahona Enrique Ibarra-Laclette Juan Francisco Ornelas |
| author_sort | Saddan Morales-Saldaña |
| collection | DOAJ |
| description | AbstractPsittacanthus schiedeanus (Cham. & Schltdl.) G.Don., 1834, is a mistletoe species in the Loranthaceae, characteristic of the canopy in cloud forest edges and widely distributed in northern Mesoamerica. Here, we report the complete chloroplast genome sequence of P. schiedeanus, the first for a species in the Psittacantheae tribe. The circularized quadripartite structure of the P. schiedeanus chloroplast genome was 122,586 bp in length and included a large single-copy region of 72,507 bp and two inverted repeats of 21,283 bp separated by a small single-copy region of 7,513 bp. The genome contained 112 genes, of which 96 are unique, including 65 protein-coding genes, 27 transfer RNA, and four ribosomal RNA. The overall GC content in the plastome of P. schiedeanus is 36.9%. Based on 43 published complete chloroplast genome sequences for species in the families Loranthaceae and Santalaceae (Santalales), the maximum-likelihood phylogenetic tree with high-support bootstrap values indicated that P. schiedeanus in the Psittacantheae tribe is sister to the tribe Lorantheae. The chloroplast genome provided in this study represents a valuable resource for genetic, phylogenetic and conservation studies of Psittacanthus species, and an important advance for unraveling the evolutionary history of these hemiparasitic plants. |
| first_indexed | 2024-03-08T09:05:37Z |
| format | Article |
| id | doaj.art-7e536b28693a4e9b88c3544e8f8db211 |
| institution | Directory Open Access Journal |
| issn | 2380-2359 |
| language | English |
| last_indexed | 2024-04-24T19:10:48Z |
| publishDate | 2024-01-01 |
| publisher | Taylor & Francis Group |
| record_format | Article |
| series | Mitochondrial DNA. Part B. Resources |
| spelling | doaj.art-7e536b28693a4e9b88c3544e8f8db2112024-03-26T11:18:59ZengTaylor & Francis GroupMitochondrial DNA. Part B. Resources2380-23592024-01-019151010.1080/23802359.2023.2298078The complete chloroplast genome sequence of Psittacanthus schiedeanus (Cham. & Schltdl.) G.Don. (Santalales: Loranthaceae), the first plastome of a mistletoe species in the Psittacantheae tribeSaddan Morales-Saldaña0Emanuel Villafán1Antonio Acini Vásquez-Aguilar2Santiago Ramírez-Barahona3Enrique Ibarra-Laclette4Juan Francisco Ornelas5Red de Biología Evolutiva, Instituto de Ecología, A.C. (INECOL), Xalapa, Veracruz, MexicoRed de Estudios Moleculares Avanzados, Instituto de Ecología, A.C. (INECOL), Xalapa, Veracruz, MexicoRed de Biología Evolutiva, Instituto de Ecología, A.C. (INECOL), Xalapa, Veracruz, MexicoDepartamento de Botánica, Instituto de Biología, Universidad Nacional Autónoma de México (UNAM), Ciudad de México, MexicoRed de Estudios Moleculares Avanzados, Instituto de Ecología, A.C. (INECOL), Xalapa, Veracruz, MexicoRed de Biología Evolutiva, Instituto de Ecología, A.C. (INECOL), Xalapa, Veracruz, MexicoAbstractPsittacanthus schiedeanus (Cham. & Schltdl.) G.Don., 1834, is a mistletoe species in the Loranthaceae, characteristic of the canopy in cloud forest edges and widely distributed in northern Mesoamerica. Here, we report the complete chloroplast genome sequence of P. schiedeanus, the first for a species in the Psittacantheae tribe. The circularized quadripartite structure of the P. schiedeanus chloroplast genome was 122,586 bp in length and included a large single-copy region of 72,507 bp and two inverted repeats of 21,283 bp separated by a small single-copy region of 7,513 bp. The genome contained 112 genes, of which 96 are unique, including 65 protein-coding genes, 27 transfer RNA, and four ribosomal RNA. The overall GC content in the plastome of P. schiedeanus is 36.9%. Based on 43 published complete chloroplast genome sequences for species in the families Loranthaceae and Santalaceae (Santalales), the maximum-likelihood phylogenetic tree with high-support bootstrap values indicated that P. schiedeanus in the Psittacantheae tribe is sister to the tribe Lorantheae. The chloroplast genome provided in this study represents a valuable resource for genetic, phylogenetic and conservation studies of Psittacanthus species, and an important advance for unraveling the evolutionary history of these hemiparasitic plants.https://www.tandfonline.com/doi/10.1080/23802359.2023.2298078Psittacanthuschloroplast genome (cpDNA)hemiparasitic plantsmistletoesLoranthaceae |
| spellingShingle | Saddan Morales-Saldaña Emanuel Villafán Antonio Acini Vásquez-Aguilar Santiago Ramírez-Barahona Enrique Ibarra-Laclette Juan Francisco Ornelas The complete chloroplast genome sequence of Psittacanthus schiedeanus (Cham. & Schltdl.) G.Don. (Santalales: Loranthaceae), the first plastome of a mistletoe species in the Psittacantheae tribe Mitochondrial DNA. Part B. Resources Psittacanthus chloroplast genome (cpDNA) hemiparasitic plants mistletoes Loranthaceae |
| title | The complete chloroplast genome sequence of Psittacanthus schiedeanus (Cham. & Schltdl.) G.Don. (Santalales: Loranthaceae), the first plastome of a mistletoe species in the Psittacantheae tribe |
| title_full | The complete chloroplast genome sequence of Psittacanthus schiedeanus (Cham. & Schltdl.) G.Don. (Santalales: Loranthaceae), the first plastome of a mistletoe species in the Psittacantheae tribe |
| title_fullStr | The complete chloroplast genome sequence of Psittacanthus schiedeanus (Cham. & Schltdl.) G.Don. (Santalales: Loranthaceae), the first plastome of a mistletoe species in the Psittacantheae tribe |
| title_full_unstemmed | The complete chloroplast genome sequence of Psittacanthus schiedeanus (Cham. & Schltdl.) G.Don. (Santalales: Loranthaceae), the first plastome of a mistletoe species in the Psittacantheae tribe |
| title_short | The complete chloroplast genome sequence of Psittacanthus schiedeanus (Cham. & Schltdl.) G.Don. (Santalales: Loranthaceae), the first plastome of a mistletoe species in the Psittacantheae tribe |
| title_sort | complete chloroplast genome sequence of psittacanthus schiedeanus cham schltdl g don santalales loranthaceae the first plastome of a mistletoe species in the psittacantheae tribe |
| topic | Psittacanthus chloroplast genome (cpDNA) hemiparasitic plants mistletoes Loranthaceae |
| url | https://www.tandfonline.com/doi/10.1080/23802359.2023.2298078 |
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