Complete genome sequencing of Pseudomonas syringae pv. actinidiae Biovar 3, P155, kiwifruit pathogen originating from China
Pseudomonas syringae pv. actinidiae is a bacterial pathogen of kiwifruit. Based on the results of the pathogenicity assay, we sequenced the strain Pseudomonas syringae (Psa3) P155 which possesses a series of virulence and resistance genes, CRISPR candidate elements, prophage related sequences, meth...
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| Format: | Article |
| Language: | English |
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Universidade Federal de Uberlândia
2020-12-01
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| Series: | Bioscience Journal |
| Subjects: | |
| Online Access: | https://seer-dev.ufu.br/index.php/biosciencejournal/article/view/47896 |
| _version_ | 1818157122184019968 |
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| author | Xin Pan Siyue Zhao Yongzhi Wang Mingzhang Li Liqin He Qiguo Zhuang |
| author_facet | Xin Pan Siyue Zhao Yongzhi Wang Mingzhang Li Liqin He Qiguo Zhuang |
| author_sort | Xin Pan |
| collection | DOAJ |
| description |
Pseudomonas syringae pv. actinidiae is a bacterial pathogen of kiwifruit. Based on the results of the pathogenicity assay, we sequenced the strain Pseudomonas syringae (Psa3) P155 which possesses a series of virulence and resistance genes, CRISPR candidate elements, prophage related sequences, methylation modifications, genomic islands as well as one plasmid. Most importantly, the copper resistance genes copA, copB, copC, copD, and copZ as well as aminoglycoside resistance gene ksgA were identified in strain P155, which would pose a threat to kiwifruit production. The complete sequence we reported here will provide valuable information for a better understanding of the genetic structure and pathogenic characteristics of the genome of P155.
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| first_indexed | 2024-12-11T15:09:10Z |
| format | Article |
| id | doaj.art-7e80d4c962bf4a06aa7e06d488a3207e |
| institution | Directory Open Access Journal |
| issn | 1981-3163 |
| language | English |
| last_indexed | 2024-12-11T15:09:10Z |
| publishDate | 2020-12-01 |
| publisher | Universidade Federal de Uberlândia |
| record_format | Article |
| series | Bioscience Journal |
| spelling | doaj.art-7e80d4c962bf4a06aa7e06d488a3207e2022-12-22T01:00:48ZengUniversidade Federal de UberlândiaBioscience Journal1981-31632020-12-01366Complete genome sequencing of Pseudomonas syringae pv. actinidiae Biovar 3, P155, kiwifruit pathogen originating from ChinaXin Pan0Siyue Zhao1Yongzhi Wang2Mingzhang Li3Liqin He4Qiguo Zhuang5Chengdu University of TechnologySichuan Agricultural UniversitySichuan Provincial Academy of Natural Resource SciencesSichuan Provincial Academy of Natural Resource SciencesSichuan Provincial Academy of Natural Resource SciencesSichuan Provincial Academy of Natural Resource Sciences Pseudomonas syringae pv. actinidiae is a bacterial pathogen of kiwifruit. Based on the results of the pathogenicity assay, we sequenced the strain Pseudomonas syringae (Psa3) P155 which possesses a series of virulence and resistance genes, CRISPR candidate elements, prophage related sequences, methylation modifications, genomic islands as well as one plasmid. Most importantly, the copper resistance genes copA, copB, copC, copD, and copZ as well as aminoglycoside resistance gene ksgA were identified in strain P155, which would pose a threat to kiwifruit production. The complete sequence we reported here will provide valuable information for a better understanding of the genetic structure and pathogenic characteristics of the genome of P155. https://seer-dev.ufu.br/index.php/biosciencejournal/article/view/47896Actinidia sp.Complete sequence.Bacterial canker.Pathogenicity.Pac-Bio platform. |
| spellingShingle | Xin Pan Siyue Zhao Yongzhi Wang Mingzhang Li Liqin He Qiguo Zhuang Complete genome sequencing of Pseudomonas syringae pv. actinidiae Biovar 3, P155, kiwifruit pathogen originating from China Bioscience Journal Actinidia sp. Complete sequence. Bacterial canker. Pathogenicity. Pac-Bio platform. |
| title | Complete genome sequencing of Pseudomonas syringae pv. actinidiae Biovar 3, P155, kiwifruit pathogen originating from China |
| title_full | Complete genome sequencing of Pseudomonas syringae pv. actinidiae Biovar 3, P155, kiwifruit pathogen originating from China |
| title_fullStr | Complete genome sequencing of Pseudomonas syringae pv. actinidiae Biovar 3, P155, kiwifruit pathogen originating from China |
| title_full_unstemmed | Complete genome sequencing of Pseudomonas syringae pv. actinidiae Biovar 3, P155, kiwifruit pathogen originating from China |
| title_short | Complete genome sequencing of Pseudomonas syringae pv. actinidiae Biovar 3, P155, kiwifruit pathogen originating from China |
| title_sort | complete genome sequencing of pseudomonas syringae pv actinidiae biovar 3 p155 kiwifruit pathogen originating from china |
| topic | Actinidia sp. Complete sequence. Bacterial canker. Pathogenicity. Pac-Bio platform. |
| url | https://seer-dev.ufu.br/index.php/biosciencejournal/article/view/47896 |
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