Identification of a Small Molecule That Inhibits the Interaction of LPS Transporters LptA and LptC

The need for novel antibiotics has become imperative with the increasing prevalence of antibiotic resistance in Gram-negative bacteria in clinics. Acting as a permeability barrier, lipopolysaccharide (LPS) protects Gram-negative bacteria against drugs. LPS is synthesized in cells and transported to...

Full description

Bibliographic Details
Main Authors: Xiaowei Dai, Min Yuan, Yu Lu, Xiaohong Zhu, Chao Liu, Yifan Zheng, Shuyi Si, Lijie Yuan, Jing Zhang, Yan Li
Format: Article
Language:English
Published: MDPI AG 2022-10-01
Series:Antibiotics
Subjects:
Online Access:https://www.mdpi.com/2079-6382/11/10/1385
_version_ 1797475855664939008
author Xiaowei Dai
Min Yuan
Yu Lu
Xiaohong Zhu
Chao Liu
Yifan Zheng
Shuyi Si
Lijie Yuan
Jing Zhang
Yan Li
author_facet Xiaowei Dai
Min Yuan
Yu Lu
Xiaohong Zhu
Chao Liu
Yifan Zheng
Shuyi Si
Lijie Yuan
Jing Zhang
Yan Li
author_sort Xiaowei Dai
collection DOAJ
description The need for novel antibiotics has become imperative with the increasing prevalence of antibiotic resistance in Gram-negative bacteria in clinics. Acting as a permeability barrier, lipopolysaccharide (LPS) protects Gram-negative bacteria against drugs. LPS is synthesized in cells and transported to the outer membrane (OM) via seven lipopolysaccharide transport (Lpt) proteins (LptA–LptG). Of these seven Lpt proteins, LptC interacts with LptA to transfer LPS from the inner membrane (IM) to the OM, and assembly is aided by LptD/LptE. This interaction among the Lpt proteins is important for the biosynthesis of LPS; therefore, the Lpt proteins, which are significant in the assembly process of LPS, can be a potential target for new antibiotics. In this study, a yeast two-hybrid (Y2H) system was used to screen compounds that could block LPS transport by inhibiting LptA/LptC interaction, which finally disrupts the biosynthesis of the OM. We selected the compound IMB-0042 for this study. Our results suggest that IMB-0042 disrupts LptA/LptC interaction by binding to both LptA and LptC. <i>Escherichia coli</i> cells, when treated with IMB-0042, showed filament morphology, impaired OM integrity, and an accumulation of LPS in the periplasm. IMB-0042 inhibited the growth of Gram-negative bacteria and showed synergistic sensitization to other antibiotics, with low cytotoxicity. Thus, we successfully identified a potential antibacterial agent by using a Y2H system, which blocks the transport of LPS by targeting LptA/LptC interaction in <i>Escherichia coli</i>.
first_indexed 2024-03-09T20:50:42Z
format Article
id doaj.art-7ea6d04e1035475c851cce4148952cf4
institution Directory Open Access Journal
issn 2079-6382
language English
last_indexed 2024-03-09T20:50:42Z
publishDate 2022-10-01
publisher MDPI AG
record_format Article
series Antibiotics
spelling doaj.art-7ea6d04e1035475c851cce4148952cf42023-11-23T22:35:34ZengMDPI AGAntibiotics2079-63822022-10-011110138510.3390/antibiotics11101385Identification of a Small Molecule That Inhibits the Interaction of LPS Transporters LptA and LptCXiaowei Dai0Min Yuan1Yu Lu2Xiaohong Zhu3Chao Liu4Yifan Zheng5Shuyi Si6Lijie Yuan7Jing Zhang8Yan Li9Key Laboratory of Antimicrobial Agents, Institute of Medicinal Biotechnology, Chinese Academy of Medical Sciences and Peking Union Medical College, Beijing 100050, ChinaState Key Laboratory for Infectious Diseases Prevention and Control, Collaborative Innovation Center for Diagnosis and Treatment of Infectious Disease, National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Control and Prevention, Beijing 102206, ChinaKey Laboratory of Antimicrobial Agents, Institute of Medicinal Biotechnology, Chinese Academy of Medical Sciences and Peking Union Medical College, Beijing 100050, ChinaKey Laboratory of Antimicrobial Agents, Institute of Medicinal Biotechnology, Chinese Academy of Medical Sciences and Peking Union Medical College, Beijing 100050, ChinaKey Laboratory of Antimicrobial Agents, Institute of Medicinal Biotechnology, Chinese Academy of Medical Sciences and Peking Union Medical College, Beijing 100050, ChinaKey Laboratory of Antimicrobial Agents, Institute of Medicinal Biotechnology, Chinese Academy of Medical Sciences and Peking Union Medical College, Beijing 100050, ChinaKey Laboratory of Antimicrobial Agents, Institute of Medicinal Biotechnology, Chinese Academy of Medical Sciences and Peking Union Medical College, Beijing 100050, ChinaHebei Key Laboratory for Chronic Diseases, Tangshan Key Laboratory for Preclinical and Basic Research on Chronic Diseases, School of Basic Medical Sciences, North China University of Science and Technology, Tangshan 063210, ChinaKey Laboratory of Antimicrobial Agents, Institute of Medicinal Biotechnology, Chinese Academy of Medical Sciences and Peking Union Medical College, Beijing 100050, ChinaKey Laboratory of Antimicrobial Agents, Institute of Medicinal Biotechnology, Chinese Academy of Medical Sciences and Peking Union Medical College, Beijing 100050, ChinaThe need for novel antibiotics has become imperative with the increasing prevalence of antibiotic resistance in Gram-negative bacteria in clinics. Acting as a permeability barrier, lipopolysaccharide (LPS) protects Gram-negative bacteria against drugs. LPS is synthesized in cells and transported to the outer membrane (OM) via seven lipopolysaccharide transport (Lpt) proteins (LptA–LptG). Of these seven Lpt proteins, LptC interacts with LptA to transfer LPS from the inner membrane (IM) to the OM, and assembly is aided by LptD/LptE. This interaction among the Lpt proteins is important for the biosynthesis of LPS; therefore, the Lpt proteins, which are significant in the assembly process of LPS, can be a potential target for new antibiotics. In this study, a yeast two-hybrid (Y2H) system was used to screen compounds that could block LPS transport by inhibiting LptA/LptC interaction, which finally disrupts the biosynthesis of the OM. We selected the compound IMB-0042 for this study. Our results suggest that IMB-0042 disrupts LptA/LptC interaction by binding to both LptA and LptC. <i>Escherichia coli</i> cells, when treated with IMB-0042, showed filament morphology, impaired OM integrity, and an accumulation of LPS in the periplasm. IMB-0042 inhibited the growth of Gram-negative bacteria and showed synergistic sensitization to other antibiotics, with low cytotoxicity. Thus, we successfully identified a potential antibacterial agent by using a Y2H system, which blocks the transport of LPS by targeting LptA/LptC interaction in <i>Escherichia coli</i>.https://www.mdpi.com/2079-6382/11/10/1385lipopolysaccharidelipopolysaccharide transport (Lpt) protein<i>Escherichia coli</i>LptA/LptC interactionyeast two-hybridantibacterial agent
spellingShingle Xiaowei Dai
Min Yuan
Yu Lu
Xiaohong Zhu
Chao Liu
Yifan Zheng
Shuyi Si
Lijie Yuan
Jing Zhang
Yan Li
Identification of a Small Molecule That Inhibits the Interaction of LPS Transporters LptA and LptC
Antibiotics
lipopolysaccharide
lipopolysaccharide transport (Lpt) protein
<i>Escherichia coli</i>
LptA/LptC interaction
yeast two-hybrid
antibacterial agent
title Identification of a Small Molecule That Inhibits the Interaction of LPS Transporters LptA and LptC
title_full Identification of a Small Molecule That Inhibits the Interaction of LPS Transporters LptA and LptC
title_fullStr Identification of a Small Molecule That Inhibits the Interaction of LPS Transporters LptA and LptC
title_full_unstemmed Identification of a Small Molecule That Inhibits the Interaction of LPS Transporters LptA and LptC
title_short Identification of a Small Molecule That Inhibits the Interaction of LPS Transporters LptA and LptC
title_sort identification of a small molecule that inhibits the interaction of lps transporters lpta and lptc
topic lipopolysaccharide
lipopolysaccharide transport (Lpt) protein
<i>Escherichia coli</i>
LptA/LptC interaction
yeast two-hybrid
antibacterial agent
url https://www.mdpi.com/2079-6382/11/10/1385
work_keys_str_mv AT xiaoweidai identificationofasmallmoleculethatinhibitstheinteractionoflpstransporterslptaandlptc
AT minyuan identificationofasmallmoleculethatinhibitstheinteractionoflpstransporterslptaandlptc
AT yulu identificationofasmallmoleculethatinhibitstheinteractionoflpstransporterslptaandlptc
AT xiaohongzhu identificationofasmallmoleculethatinhibitstheinteractionoflpstransporterslptaandlptc
AT chaoliu identificationofasmallmoleculethatinhibitstheinteractionoflpstransporterslptaandlptc
AT yifanzheng identificationofasmallmoleculethatinhibitstheinteractionoflpstransporterslptaandlptc
AT shuyisi identificationofasmallmoleculethatinhibitstheinteractionoflpstransporterslptaandlptc
AT lijieyuan identificationofasmallmoleculethatinhibitstheinteractionoflpstransporterslptaandlptc
AT jingzhang identificationofasmallmoleculethatinhibitstheinteractionoflpstransporterslptaandlptc
AT yanli identificationofasmallmoleculethatinhibitstheinteractionoflpstransporterslptaandlptc