De novo transcriptome assembly, gene annotation, and EST-SSR marker development of an important medicinal and edible crop, Amomum tsaoko (Zingiberaceae)

De novo transcriptome assembly, gene annotation, and EST-SSR marker development of an important medicinal and edible crop, Amomum tsaoko (Zingiberaceae)

Abstract Background Amomum tsaoko is a medicinal and food dual-use crop that belongs to the Zingiberaceae family. However, the lack of transcriptomic and genomic information has limited the understanding of the genetic basis of this species. Here, we performed transcriptome sequencing of samples fro...

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Bibliographic Details
Main Authors: Mengli Ma, Hengling Meng, En Lei, Tiantao Wang, Wei Zhang, Bingyue Lu
Format: Article
Language:English
Published: BMC 2022-09-01
Series:BMC Plant Biology
Subjects:
Amomum tsaoko
Transcriptome sequencing
EST-SSR markers
Genetic diversity
Online Access:https://doi.org/10.1186/s12870-022-03827-y

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