Characterization of the complete mitochondrial genome of convex reef crab Carpilius convexus (Forskål, 1775)
The complete mitochondrial genome of convex reef crab Carpilius convexus was determined and characterized for the first time from the South China Sea. The whole mitogenome is 15,766 bp long and consists of 22 tRNA genes, 2 rRNA genes, 13 protein-coding genes (PCGs), and 1 control region. The nucleot...
| Main Authors: | , |
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| Format: | Article |
| Language: | English |
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Taylor & Francis Group
2021-03-01
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| Series: | Mitochondrial DNA. Part B. Resources |
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| Online Access: | http://dx.doi.org/10.1080/23802359.2021.1901618 |
| _version_ | 1797638942492721152 |
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| author | Hongtao Liu Bingshun Li |
| author_facet | Hongtao Liu Bingshun Li |
| author_sort | Hongtao Liu |
| collection | DOAJ |
| description | The complete mitochondrial genome of convex reef crab Carpilius convexus was determined and characterized for the first time from the South China Sea. The whole mitogenome is 15,766 bp long and consists of 22 tRNA genes, 2 rRNA genes, 13 protein-coding genes (PCGs), and 1 control region. The nucleotide composition of the mitogenome is significantly biased (A, G, T, and C is 36.91%, 17.94%, 34.95%, and 10.19%, respectively) with A + T contents of 71.86%. All PCGs start with a normal initiation codon ATN and terminate with a standard stop codon except ND1 gene end with TTG. Five microsatellites are identified in C. convexus mitogenome sequences. The phylogenetic tree showed that C. convexus was first clustered with Carpilius maculatus, and strongly supports that the recognition of the Carpiliidae as a monophyletic family. |
| first_indexed | 2024-03-11T13:10:39Z |
| format | Article |
| id | doaj.art-7fa7195818134311b82fe4f879f6bf93 |
| institution | Directory Open Access Journal |
| issn | 2380-2359 |
| language | English |
| last_indexed | 2024-03-11T13:10:39Z |
| publishDate | 2021-03-01 |
| publisher | Taylor & Francis Group |
| record_format | Article |
| series | Mitochondrial DNA. Part B. Resources |
| spelling | doaj.art-7fa7195818134311b82fe4f879f6bf932023-11-03T14:16:07ZengTaylor & Francis GroupMitochondrial DNA. Part B. Resources2380-23592021-03-01631147114910.1080/23802359.2021.19016181901618Characterization of the complete mitochondrial genome of convex reef crab Carpilius convexus (Forskål, 1775)Hongtao Liu0Bingshun Li1Ministry of Education, Key Laboratory of Utilization and Conservation for Tropical Marine Bioresources, Hainan Tropical Ocean UniversityHainan Provincial Key Laboratory of Tropical Maricultural Technologies, Hainan Academy of Ocean and Fisheries SciencesThe complete mitochondrial genome of convex reef crab Carpilius convexus was determined and characterized for the first time from the South China Sea. The whole mitogenome is 15,766 bp long and consists of 22 tRNA genes, 2 rRNA genes, 13 protein-coding genes (PCGs), and 1 control region. The nucleotide composition of the mitogenome is significantly biased (A, G, T, and C is 36.91%, 17.94%, 34.95%, and 10.19%, respectively) with A + T contents of 71.86%. All PCGs start with a normal initiation codon ATN and terminate with a standard stop codon except ND1 gene end with TTG. Five microsatellites are identified in C. convexus mitogenome sequences. The phylogenetic tree showed that C. convexus was first clustered with Carpilius maculatus, and strongly supports that the recognition of the Carpiliidae as a monophyletic family.http://dx.doi.org/10.1080/23802359.2021.1901618carpilius convexusmitochondrial genomephylogenetic analysis |
| spellingShingle | Hongtao Liu Bingshun Li Characterization of the complete mitochondrial genome of convex reef crab Carpilius convexus (Forskål, 1775) Mitochondrial DNA. Part B. Resources carpilius convexus mitochondrial genome phylogenetic analysis |
| title | Characterization of the complete mitochondrial genome of convex reef crab Carpilius convexus (Forskål, 1775) |
| title_full | Characterization of the complete mitochondrial genome of convex reef crab Carpilius convexus (Forskål, 1775) |
| title_fullStr | Characterization of the complete mitochondrial genome of convex reef crab Carpilius convexus (Forskål, 1775) |
| title_full_unstemmed | Characterization of the complete mitochondrial genome of convex reef crab Carpilius convexus (Forskål, 1775) |
| title_short | Characterization of the complete mitochondrial genome of convex reef crab Carpilius convexus (Forskål, 1775) |
| title_sort | characterization of the complete mitochondrial genome of convex reef crab carpilius convexus forskal 1775 |
| topic | carpilius convexus mitochondrial genome phylogenetic analysis |
| url | http://dx.doi.org/10.1080/23802359.2021.1901618 |
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