Phospholipids are imported into mitochondria by VDAC, a dimeric beta barrel scramblase

Abstract Mitochondria are double-membrane-bounded organelles that depend critically on phospholipids supplied by the endoplasmic reticulum. These lipids must cross the outer membrane to support mitochondrial function, but how they do this is unclear. We identify the Voltage Dependent Anion Channel (...

Full description

Bibliographic Details
Main Authors: Helene Jahn, Ladislav Bartoš, Grace I. Dearden, Jeremy S. Dittman, Joost C. M. Holthuis, Robert Vácha, Anant K. Menon
Format: Article
Language:English
Published: Nature Portfolio 2023-12-01
Series:Nature Communications
Online Access:https://doi.org/10.1038/s41467-023-43570-y
_version_ 1827581504329351168
author Helene Jahn
Ladislav Bartoš
Grace I. Dearden
Jeremy S. Dittman
Joost C. M. Holthuis
Robert Vácha
Anant K. Menon
author_facet Helene Jahn
Ladislav Bartoš
Grace I. Dearden
Jeremy S. Dittman
Joost C. M. Holthuis
Robert Vácha
Anant K. Menon
author_sort Helene Jahn
collection DOAJ
description Abstract Mitochondria are double-membrane-bounded organelles that depend critically on phospholipids supplied by the endoplasmic reticulum. These lipids must cross the outer membrane to support mitochondrial function, but how they do this is unclear. We identify the Voltage Dependent Anion Channel (VDAC), an abundant outer membrane protein, as a scramblase-type lipid transporter that catalyzes lipid entry. On reconstitution into membrane vesicles, dimers of human VDAC1 and VDAC2 catalyze rapid transbilayer translocation of phospholipids by a mechanism that is unrelated to their channel activity. Coarse-grained molecular dynamics simulations of VDAC1 reveal that lipid scrambling occurs at a specific dimer interface where polar residues induce large water defects and bilayer thinning. The rate of phospholipid import into yeast mitochondria is an order of magnitude lower in the absence of VDAC homologs, indicating that VDACs provide the main pathway for lipid entry. Thus, VDAC isoforms, members of a superfamily of beta barrel proteins, moonlight as a class of phospholipid scramblases - distinct from alpha-helical scramblase proteins - that act to import lipids into mitochondria.
first_indexed 2024-03-08T22:37:28Z
format Article
id doaj.art-80090a11e13246b496e3a818de0be8af
institution Directory Open Access Journal
issn 2041-1723
language English
last_indexed 2024-03-08T22:37:28Z
publishDate 2023-12-01
publisher Nature Portfolio
record_format Article
series Nature Communications
spelling doaj.art-80090a11e13246b496e3a818de0be8af2023-12-17T12:23:14ZengNature PortfolioNature Communications2041-17232023-12-0114111610.1038/s41467-023-43570-yPhospholipids are imported into mitochondria by VDAC, a dimeric beta barrel scramblaseHelene Jahn0Ladislav Bartoš1Grace I. Dearden2Jeremy S. Dittman3Joost C. M. Holthuis4Robert Vácha5Anant K. Menon6Department of Biochemistry, Weill Cornell Medical CollegeCEITEC - Central European Institute of Technology, Masaryk UniversityDepartment of Biochemistry, Weill Cornell Medical CollegeDepartment of Biochemistry, Weill Cornell Medical CollegeDepartment of Molecular Cell Biology, University of OsnabrückCEITEC - Central European Institute of Technology, Masaryk UniversityDepartment of Biochemistry, Weill Cornell Medical CollegeAbstract Mitochondria are double-membrane-bounded organelles that depend critically on phospholipids supplied by the endoplasmic reticulum. These lipids must cross the outer membrane to support mitochondrial function, but how they do this is unclear. We identify the Voltage Dependent Anion Channel (VDAC), an abundant outer membrane protein, as a scramblase-type lipid transporter that catalyzes lipid entry. On reconstitution into membrane vesicles, dimers of human VDAC1 and VDAC2 catalyze rapid transbilayer translocation of phospholipids by a mechanism that is unrelated to their channel activity. Coarse-grained molecular dynamics simulations of VDAC1 reveal that lipid scrambling occurs at a specific dimer interface where polar residues induce large water defects and bilayer thinning. The rate of phospholipid import into yeast mitochondria is an order of magnitude lower in the absence of VDAC homologs, indicating that VDACs provide the main pathway for lipid entry. Thus, VDAC isoforms, members of a superfamily of beta barrel proteins, moonlight as a class of phospholipid scramblases - distinct from alpha-helical scramblase proteins - that act to import lipids into mitochondria.https://doi.org/10.1038/s41467-023-43570-y
spellingShingle Helene Jahn
Ladislav Bartoš
Grace I. Dearden
Jeremy S. Dittman
Joost C. M. Holthuis
Robert Vácha
Anant K. Menon
Phospholipids are imported into mitochondria by VDAC, a dimeric beta barrel scramblase
Nature Communications
title Phospholipids are imported into mitochondria by VDAC, a dimeric beta barrel scramblase
title_full Phospholipids are imported into mitochondria by VDAC, a dimeric beta barrel scramblase
title_fullStr Phospholipids are imported into mitochondria by VDAC, a dimeric beta barrel scramblase
title_full_unstemmed Phospholipids are imported into mitochondria by VDAC, a dimeric beta barrel scramblase
title_short Phospholipids are imported into mitochondria by VDAC, a dimeric beta barrel scramblase
title_sort phospholipids are imported into mitochondria by vdac a dimeric beta barrel scramblase
url https://doi.org/10.1038/s41467-023-43570-y
work_keys_str_mv AT helenejahn phospholipidsareimportedintomitochondriabyvdacadimericbetabarrelscramblase
AT ladislavbartos phospholipidsareimportedintomitochondriabyvdacadimericbetabarrelscramblase
AT graceidearden phospholipidsareimportedintomitochondriabyvdacadimericbetabarrelscramblase
AT jeremysdittman phospholipidsareimportedintomitochondriabyvdacadimericbetabarrelscramblase
AT joostcmholthuis phospholipidsareimportedintomitochondriabyvdacadimericbetabarrelscramblase
AT robertvacha phospholipidsareimportedintomitochondriabyvdacadimericbetabarrelscramblase
AT anantkmenon phospholipidsareimportedintomitochondriabyvdacadimericbetabarrelscramblase