The complete chloroplast genome of Fritillaria yuminensis, a rare and endangered species endemic to China
ABSTRACT Fritillaria yuminensis is a medicinal species endemic to northwest Xinjiang, China. The complete chloroplast genome sequence of F. yuminensis was sequenced by Illumina Hiseq platform. The complete cp genome was 151,813 bp in length, containing a pair of inverted repeats (IRa and IRb) of 26,...
| Main Authors: | , , |
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| Format: | Article |
| Language: | English |
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Taylor & Francis Group
2017-12-01
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| Series: | Mitochondrial DNA. Part B. Resources |
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| Online Access: | http://dx.doi.org/10.1080/23802359.2017.1413315 |
| _version_ | 1797640766327095296 |
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| author | Yan Li Zhirong Zhang Guanghui Lv |
| author_facet | Yan Li Zhirong Zhang Guanghui Lv |
| author_sort | Yan Li |
| collection | DOAJ |
| description | ABSTRACT Fritillaria yuminensis is a medicinal species endemic to northwest Xinjiang, China. The complete chloroplast genome sequence of F. yuminensis was sequenced by Illumina Hiseq platform. The complete cp genome was 151,813 bp in length, containing a pair of inverted repeats (IRa and IRb) of 26,377 bp, a large single copy (LSC) of 81,533 bp and a small single copy (SSC) of 17,526 bp, respectively. The overall GC contents was 36.9%. A total of 114 genes were annotated, including 80 protein-coding genes, 30 tRNA genes and 4 rRNA genes. A maximum-likelihood phylogenetic analysis indicated that F. yuminensis was closely related to F. tortifolia and F. verticillata. |
| first_indexed | 2024-03-11T13:35:27Z |
| format | Article |
| id | doaj.art-803fdc73e1ed4a9c9e53b2be6e442b89 |
| institution | Directory Open Access Journal |
| issn | 2380-2359 |
| language | English |
| last_indexed | 2024-03-11T13:35:27Z |
| publishDate | 2017-12-01 |
| publisher | Taylor & Francis Group |
| record_format | Article |
| series | Mitochondrial DNA. Part B. Resources |
| spelling | doaj.art-803fdc73e1ed4a9c9e53b2be6e442b892023-11-02T15:42:59ZengTaylor & Francis GroupMitochondrial DNA. Part B. Resources2380-23592017-12-012291391410.1080/23802359.2017.14133151413315The complete chloroplast genome of Fritillaria yuminensis, a rare and endangered species endemic to ChinaYan Li0Zhirong Zhang1Guanghui Lv2Xinjiang UniversityKunming Institution of Botany, Chinese Academy of SciencesXinjiang UniversityABSTRACT Fritillaria yuminensis is a medicinal species endemic to northwest Xinjiang, China. The complete chloroplast genome sequence of F. yuminensis was sequenced by Illumina Hiseq platform. The complete cp genome was 151,813 bp in length, containing a pair of inverted repeats (IRa and IRb) of 26,377 bp, a large single copy (LSC) of 81,533 bp and a small single copy (SSC) of 17,526 bp, respectively. The overall GC contents was 36.9%. A total of 114 genes were annotated, including 80 protein-coding genes, 30 tRNA genes and 4 rRNA genes. A maximum-likelihood phylogenetic analysis indicated that F. yuminensis was closely related to F. tortifolia and F. verticillata.http://dx.doi.org/10.1080/23802359.2017.1413315fritillaria yuminensischloroplast genomephylogenetic analysis |
| spellingShingle | Yan Li Zhirong Zhang Guanghui Lv The complete chloroplast genome of Fritillaria yuminensis, a rare and endangered species endemic to China Mitochondrial DNA. Part B. Resources fritillaria yuminensis chloroplast genome phylogenetic analysis |
| title | The complete chloroplast genome of Fritillaria yuminensis, a rare and endangered species endemic to China |
| title_full | The complete chloroplast genome of Fritillaria yuminensis, a rare and endangered species endemic to China |
| title_fullStr | The complete chloroplast genome of Fritillaria yuminensis, a rare and endangered species endemic to China |
| title_full_unstemmed | The complete chloroplast genome of Fritillaria yuminensis, a rare and endangered species endemic to China |
| title_short | The complete chloroplast genome of Fritillaria yuminensis, a rare and endangered species endemic to China |
| title_sort | complete chloroplast genome of fritillaria yuminensis a rare and endangered species endemic to china |
| topic | fritillaria yuminensis chloroplast genome phylogenetic analysis |
| url | http://dx.doi.org/10.1080/23802359.2017.1413315 |
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