The linear mitochondrial genome of commensal hydroid Eutima japonica (Cnidaria, Hydrozoa, Eirenidae)
Here, we present the whole mitochondrial genome of commensal hydroid Eutima japonica McCrady 1859 (family Eirinidae); this is the first specimen of the family to have its mitogenome sequenced. The linear mitogenome is 15,315 bp in length and consists of 13 protein-coding genes (PCGs), large and smal...
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| Format: | Article |
| Language: | English |
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Taylor & Francis Group
2021-03-01
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| Series: | Mitochondrial DNA. Part B. Resources |
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| Online Access: | http://dx.doi.org/10.1080/23802359.2021.1899869 |
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| author | Jung Soo Seo Hey-Jin Eom Jae-Kwon Cho Hyun-Sil Kang Jae-Sung Rhee |
| author_facet | Jung Soo Seo Hey-Jin Eom Jae-Kwon Cho Hyun-Sil Kang Jae-Sung Rhee |
| author_sort | Jung Soo Seo |
| collection | DOAJ |
| description | Here, we present the whole mitochondrial genome of commensal hydroid Eutima japonica McCrady 1859 (family Eirinidae); this is the first specimen of the family to have its mitogenome sequenced. The linear mitogenome is 15,315 bp in length and consists of 13 protein-coding genes (PCGs), large and small ribosomal subunits (rRNA), methionine and tryptophan transfer RNA (tRNA) genes (trnM and trnW), and a partial copy of cytochrome oxidase subunit I (cox1) pseudogene, as is typical for the class Hydrozoa. Nucleotide sequences of two cox1 genes at two ends of the linear mitogenome form a part of inverted terminal repeat. The overall genomic structure and gene arrangement of 13 PCGs were identical to the reported mitochondrial genomes of hydrozoans, except for the positions of two tRNA genes. Phylogenetic analysis of E. japonica 13 PCGs and other cnidarians recovers a closest relationship with the derived cluster of two hydrozoans, Laomedea flexuosa and Obelia longissimi within Leptothecata. |
| first_indexed | 2024-03-11T13:10:39Z |
| format | Article |
| id | doaj.art-80531988836b41c1a6951f5ab2f94fa0 |
| institution | Directory Open Access Journal |
| issn | 2380-2359 |
| language | English |
| last_indexed | 2024-03-11T13:10:39Z |
| publishDate | 2021-03-01 |
| publisher | Taylor & Francis Group |
| record_format | Article |
| series | Mitochondrial DNA. Part B. Resources |
| spelling | doaj.art-80531988836b41c1a6951f5ab2f94fa02023-11-03T14:16:07ZengTaylor & Francis GroupMitochondrial DNA. Part B. Resources2380-23592021-03-01631082108410.1080/23802359.2021.18998691899869The linear mitochondrial genome of commensal hydroid Eutima japonica (Cnidaria, Hydrozoa, Eirenidae)Jung Soo Seo0Hey-Jin Eom1Jae-Kwon Cho2Hyun-Sil Kang3Jae-Sung Rhee4Southeast Sea Fisheries Research Institute, National Institute of Fisheries ScienceDepartment of Marine Science, College of Natural Sciences, Incheon National UniversitySoutheast Sea Fisheries Research Institute, National Institute of Fisheries ScienceSoutheast Sea Fisheries Research Institute, National Institute of Fisheries ScienceDepartment of Marine Science, College of Natural Sciences, Incheon National UniversityHere, we present the whole mitochondrial genome of commensal hydroid Eutima japonica McCrady 1859 (family Eirinidae); this is the first specimen of the family to have its mitogenome sequenced. The linear mitogenome is 15,315 bp in length and consists of 13 protein-coding genes (PCGs), large and small ribosomal subunits (rRNA), methionine and tryptophan transfer RNA (tRNA) genes (trnM and trnW), and a partial copy of cytochrome oxidase subunit I (cox1) pseudogene, as is typical for the class Hydrozoa. Nucleotide sequences of two cox1 genes at two ends of the linear mitogenome form a part of inverted terminal repeat. The overall genomic structure and gene arrangement of 13 PCGs were identical to the reported mitochondrial genomes of hydrozoans, except for the positions of two tRNA genes. Phylogenetic analysis of E. japonica 13 PCGs and other cnidarians recovers a closest relationship with the derived cluster of two hydrozoans, Laomedea flexuosa and Obelia longissimi within Leptothecata.http://dx.doi.org/10.1080/23802359.2021.1899869commensal hydroideutima japonicaleptothecatalinear mitogenomephylogeny |
| spellingShingle | Jung Soo Seo Hey-Jin Eom Jae-Kwon Cho Hyun-Sil Kang Jae-Sung Rhee The linear mitochondrial genome of commensal hydroid Eutima japonica (Cnidaria, Hydrozoa, Eirenidae) Mitochondrial DNA. Part B. Resources commensal hydroid eutima japonica leptothecata linear mitogenome phylogeny |
| title | The linear mitochondrial genome of commensal hydroid Eutima japonica (Cnidaria, Hydrozoa, Eirenidae) |
| title_full | The linear mitochondrial genome of commensal hydroid Eutima japonica (Cnidaria, Hydrozoa, Eirenidae) |
| title_fullStr | The linear mitochondrial genome of commensal hydroid Eutima japonica (Cnidaria, Hydrozoa, Eirenidae) |
| title_full_unstemmed | The linear mitochondrial genome of commensal hydroid Eutima japonica (Cnidaria, Hydrozoa, Eirenidae) |
| title_short | The linear mitochondrial genome of commensal hydroid Eutima japonica (Cnidaria, Hydrozoa, Eirenidae) |
| title_sort | linear mitochondrial genome of commensal hydroid eutima japonica cnidaria hydrozoa eirenidae |
| topic | commensal hydroid eutima japonica leptothecata linear mitogenome phylogeny |
| url | http://dx.doi.org/10.1080/23802359.2021.1899869 |
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