Bacteriophages: Underestimated vehicles of antibiotic resistance genes in the soil

Bacteriophages (phages), the most abundant biological entities on Earth, have a significant effect on the composition and dynamics of microbial communities, biogeochemical cycles of global ecosystems, and bacterial evolution. A variety of antibiotic resistance genes (ARGs) have been identified in ph...

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Main Authors: Yue Zhang, Yajie Guo, Tianlei Qiu, Min Gao, Xuming Wang
Format: Article
Language:English
Published: Frontiers Media S.A. 2022-08-01
Series:Frontiers in Microbiology
Subjects:
Online Access:https://www.frontiersin.org/articles/10.3389/fmicb.2022.936267/full
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author Yue Zhang
Yajie Guo
Tianlei Qiu
Min Gao
Xuming Wang
author_facet Yue Zhang
Yajie Guo
Tianlei Qiu
Min Gao
Xuming Wang
author_sort Yue Zhang
collection DOAJ
description Bacteriophages (phages), the most abundant biological entities on Earth, have a significant effect on the composition and dynamics of microbial communities, biogeochemical cycles of global ecosystems, and bacterial evolution. A variety of antibiotic resistance genes (ARGs) have been identified in phage genomes in different soil samples. Phages can mediate the transfer of ARGs between bacteria via transduction. Recent studies have suggested that anthropogenic activities promote phage-mediated horizontal gene transfer events. Therefore, the role of phages in the dissemination of ARGs, which are a potential threat to human health, may be underestimated. However, the contribution of phages to the transfer of ARGs is still poorly understood. Considering the growing and wide concerns of antibiotic resistance, phages should be considered a research focus in the mobile resistome. This review aimed to provide an overview of phages as vehicles of ARGs in soil. Here, we summarized the current knowledge on the diversity and abundance of ARGs in soilborne phages and analyzed the contribution of phages to the horizontal transfer of ARGs. Finally, research deficiencies and future perspectives were discussed. This study provides a reference for preventing and controlling ARG pollution in agricultural systems.
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spelling doaj.art-80e7cb1756be4799aa1c24bd4cd861ec2022-12-22T00:53:40ZengFrontiers Media S.A.Frontiers in Microbiology1664-302X2022-08-011310.3389/fmicb.2022.936267936267Bacteriophages: Underestimated vehicles of antibiotic resistance genes in the soilYue ZhangYajie GuoTianlei QiuMin GaoXuming WangBacteriophages (phages), the most abundant biological entities on Earth, have a significant effect on the composition and dynamics of microbial communities, biogeochemical cycles of global ecosystems, and bacterial evolution. A variety of antibiotic resistance genes (ARGs) have been identified in phage genomes in different soil samples. Phages can mediate the transfer of ARGs between bacteria via transduction. Recent studies have suggested that anthropogenic activities promote phage-mediated horizontal gene transfer events. Therefore, the role of phages in the dissemination of ARGs, which are a potential threat to human health, may be underestimated. However, the contribution of phages to the transfer of ARGs is still poorly understood. Considering the growing and wide concerns of antibiotic resistance, phages should be considered a research focus in the mobile resistome. This review aimed to provide an overview of phages as vehicles of ARGs in soil. Here, we summarized the current knowledge on the diversity and abundance of ARGs in soilborne phages and analyzed the contribution of phages to the horizontal transfer of ARGs. Finally, research deficiencies and future perspectives were discussed. This study provides a reference for preventing and controlling ARG pollution in agricultural systems.https://www.frontiersin.org/articles/10.3389/fmicb.2022.936267/fullbacteriophagesantibiotic resistance genesmobile antibiotic resistomehorizontal gene transfersoil
spellingShingle Yue Zhang
Yajie Guo
Tianlei Qiu
Min Gao
Xuming Wang
Bacteriophages: Underestimated vehicles of antibiotic resistance genes in the soil
Frontiers in Microbiology
bacteriophages
antibiotic resistance genes
mobile antibiotic resistome
horizontal gene transfer
soil
title Bacteriophages: Underestimated vehicles of antibiotic resistance genes in the soil
title_full Bacteriophages: Underestimated vehicles of antibiotic resistance genes in the soil
title_fullStr Bacteriophages: Underestimated vehicles of antibiotic resistance genes in the soil
title_full_unstemmed Bacteriophages: Underestimated vehicles of antibiotic resistance genes in the soil
title_short Bacteriophages: Underestimated vehicles of antibiotic resistance genes in the soil
title_sort bacteriophages underestimated vehicles of antibiotic resistance genes in the soil
topic bacteriophages
antibiotic resistance genes
mobile antibiotic resistome
horizontal gene transfer
soil
url https://www.frontiersin.org/articles/10.3389/fmicb.2022.936267/full
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AT tianleiqiu bacteriophagesunderestimatedvehiclesofantibioticresistancegenesinthesoil
AT mingao bacteriophagesunderestimatedvehiclesofantibioticresistancegenesinthesoil
AT xumingwang bacteriophagesunderestimatedvehiclesofantibioticresistancegenesinthesoil