Genotyping by sequencing for estimating relative abundances of diatom taxa in mock communities

Genotyping by sequencing for estimating relative abundances of diatom taxa in mock communities

Abstract Background Diatoms are present in all waters and are highly sensitive to pollution gradients. Therefore, they are ideal bioindicators for water quality assessment. Current indices used in these applications are based on identifying diatom species and counting their abundances using traditio...

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Bibliographic Details
Main Authors: Ozan Çiftçi, Cornelis A. M. Wagemaker, Adrienne Mertens, Peter van Bodegom, Walter Pirovano, Barbara Gravendeel
Format: Article
Language:English
Published: BMC 2023-02-01
Series:BMC Ecology and Evolution
Subjects:
Diatoms
GBS
Mock communities
Quantification
Relative abundance
Water quality assessment
Online Access:https://doi.org/10.1186/s12862-023-02104-2

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