Next-Generation Sequencing of Carbapenem-Resistant <i>Klebsiella pneumoniae</i> Strains Isolated from Patients Hospitalized in the University Hospital Facilities

Carbapenem-resistant (CR) <i>Klebsiella pneumoniae</i> represents an urgent worldwide threat. We focused on CR <i>K. pneumoniae</i> in selected facilities of the University Hospital Bratislava (UHB) to investigate sequence types (STs), clonal relatedness, and antimicrobial re...

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Bibliographic Details
Main Authors: Ján Koreň, Michal Andrezál, Hana Drahovská, Zuzana Hubenáková, Adriána Liptáková, Tibor Maliar
Format: Article
Language:English
Published: MDPI AG 2022-11-01
Series:Antibiotics
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Online Access:https://www.mdpi.com/2079-6382/11/11/1538
Description
Summary:Carbapenem-resistant (CR) <i>Klebsiella pneumoniae</i> represents an urgent worldwide threat. We focused on CR <i>K. pneumoniae</i> in selected facilities of the University Hospital Bratislava (UHB) to investigate sequence types (STs), clonal relatedness, and antimicrobial resistance. Suspected carbapenem-nonsusceptible <i>K. pneumoniae</i> strains were obtained from hospitalized patients. Further examination included carbapenemase confirmation, cgMLST, and quantitative susceptibility testing. Of the total 41 CR <i>K. pneumoniae</i> strains, 26 (63.4%) were determined as ST11 in hospital No. 1; of these ST11, 22 (84.6%) were found in the first internal clinic. Six (14.6%) ST258 and three (7.3%) ST584 occurred in hospital No. 2; the most, i.e., four (66.7%), ST258 were detected in the geriatric clinic. In hospital No. 3, we found two (4.8%) ST584 and one (2.4%) ST258. Of the ST11 set, 24 (92.3%) produced NDM-1. Furthermore, seven (87.5) ST258 and five (100%) ST584 strains generated KPC-2. Antimicrobial resistance was as follows: ertapenem 97.6%, meropenem 63.4%, tigecycline 7.3%, eravacycline 7.3%, and colistin 2.5%. We revealed a presumably epidemiological association of ST11 with transmission, particularly in the first internal clinic of hospital No. 1, while ST258 and ST584 were related to interhospital dissemination between medical facilities No. 2 and No. 3. It is essential to prevent the circulation of these pathogens within and between healthcare facilities.
ISSN:2079-6382