The complete mitochondrial genome of Sardinella fijiensis (Clupeiformes: clupeidae) and phylogenetic studies of clupeidae
The complete mitochondrial genome of Sardinella fijiensis was determined in this study, which was 16,651bp long, containing 13 protein-coding genes, 2 rRNA genes, 22 tRNA genes, a putative control region and one origin of replication on the light-strand. The overall base composition includes C (29.4...
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| Format: | Article |
| Language: | English |
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Taylor & Francis Group
2019-01-01
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| Series: | Mitochondrial DNA. Part B. Resources |
| Subjects: | |
| Online Access: | http://dx.doi.org/10.1080/23802359.2019.1598301 |
| _version_ | 1797639861992161280 |
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| author | Zhifu Wang Yifan Liu Weihua Feng Lihong Chen Zengliang Miao Jian Chen |
| author_facet | Zhifu Wang Yifan Liu Weihua Feng Lihong Chen Zengliang Miao Jian Chen |
| author_sort | Zhifu Wang |
| collection | DOAJ |
| description | The complete mitochondrial genome of Sardinella fijiensis was determined in this study, which was 16,651bp long, containing 13 protein-coding genes, 2 rRNA genes, 22 tRNA genes, a putative control region and one origin of replication on the light-strand. The overall base composition includes C (29.4%), A (26.4%), T (24.7%), and G (19.5%). Moreover, the 13 PCGs encode 3799 amino acids in total, 12 of which use the initiation codon ATG except COI uses GTG, most of them have complete stop codon, whereas three protein-coding genes (COII, ND4, and Cytb) ended with the incomplete stop codon represented as a single T. The phylogenetic tree based on the Neighbor Joining method was constructed to provide relationship within Clupeidae, which could be a useful basis for the further understanding of this species. |
| first_indexed | 2024-03-11T13:23:38Z |
| format | Article |
| id | doaj.art-82516ff16f114197b0e4bca517de4013 |
| institution | Directory Open Access Journal |
| issn | 2380-2359 |
| language | English |
| last_indexed | 2024-03-11T13:23:38Z |
| publishDate | 2019-01-01 |
| publisher | Taylor & Francis Group |
| record_format | Article |
| series | Mitochondrial DNA. Part B. Resources |
| spelling | doaj.art-82516ff16f114197b0e4bca517de40132023-11-03T10:06:43ZengTaylor & Francis GroupMitochondrial DNA. Part B. Resources2380-23592019-01-01411413141410.1080/23802359.2019.15983011598301The complete mitochondrial genome of Sardinella fijiensis (Clupeiformes: clupeidae) and phylogenetic studies of clupeidaeZhifu Wang0Yifan Liu1Weihua Feng2Lihong Chen3Zengliang Miao4Jian Chen5Second Institute of Oceanography, MNRMarine Science and Technology College, Zhejiang Ocean UniversitySecond Institute of Oceanography, MNRSecond Institute of Oceanography, MNRMarine Science and Technology College, Zhejiang Ocean UniversityMarine Science and Technology College, Zhejiang Ocean UniversityThe complete mitochondrial genome of Sardinella fijiensis was determined in this study, which was 16,651bp long, containing 13 protein-coding genes, 2 rRNA genes, 22 tRNA genes, a putative control region and one origin of replication on the light-strand. The overall base composition includes C (29.4%), A (26.4%), T (24.7%), and G (19.5%). Moreover, the 13 PCGs encode 3799 amino acids in total, 12 of which use the initiation codon ATG except COI uses GTG, most of them have complete stop codon, whereas three protein-coding genes (COII, ND4, and Cytb) ended with the incomplete stop codon represented as a single T. The phylogenetic tree based on the Neighbor Joining method was constructed to provide relationship within Clupeidae, which could be a useful basis for the further understanding of this species.http://dx.doi.org/10.1080/23802359.2019.1598301sardinella fijiensismitogenomephylogenetic tree |
| spellingShingle | Zhifu Wang Yifan Liu Weihua Feng Lihong Chen Zengliang Miao Jian Chen The complete mitochondrial genome of Sardinella fijiensis (Clupeiformes: clupeidae) and phylogenetic studies of clupeidae Mitochondrial DNA. Part B. Resources sardinella fijiensis mitogenome phylogenetic tree |
| title | The complete mitochondrial genome of Sardinella fijiensis (Clupeiformes: clupeidae) and phylogenetic studies of clupeidae |
| title_full | The complete mitochondrial genome of Sardinella fijiensis (Clupeiformes: clupeidae) and phylogenetic studies of clupeidae |
| title_fullStr | The complete mitochondrial genome of Sardinella fijiensis (Clupeiformes: clupeidae) and phylogenetic studies of clupeidae |
| title_full_unstemmed | The complete mitochondrial genome of Sardinella fijiensis (Clupeiformes: clupeidae) and phylogenetic studies of clupeidae |
| title_short | The complete mitochondrial genome of Sardinella fijiensis (Clupeiformes: clupeidae) and phylogenetic studies of clupeidae |
| title_sort | complete mitochondrial genome of sardinella fijiensis clupeiformes clupeidae and phylogenetic studies of clupeidae |
| topic | sardinella fijiensis mitogenome phylogenetic tree |
| url | http://dx.doi.org/10.1080/23802359.2019.1598301 |
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