The complete chloroplast genome sequence of Viburnum odoratissinum
Viburnum odoratissinum has very high ornamental and medicinal value. In this study, the chloroplast (cp) genome sequence of V. odoratissinum was characterized using Illumina pair-end sequencing. The complete cp genome was 158,757 bp in length, containing a large single-copy region (LSC) of 87,350 bp...
| Main Authors: | , , |
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| Format: | Article |
| Language: | English |
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Taylor & Francis Group
2020-04-01
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| Series: | Mitochondrial DNA. Part B. Resources |
| Subjects: | |
| Online Access: | http://dx.doi.org/10.1080/23802359.2020.1752836 |
| _version_ | 1797639223157719040 |
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| author | Ying Wang Chengjie Guo Xingya Wang |
| author_facet | Ying Wang Chengjie Guo Xingya Wang |
| author_sort | Ying Wang |
| collection | DOAJ |
| description | Viburnum odoratissinum has very high ornamental and medicinal value. In this study, the chloroplast (cp) genome sequence of V. odoratissinum was characterized using Illumina pair-end sequencing. The complete cp genome was 158,757 bp in length, containing a large single-copy region (LSC) of 87,350 bp and a small single-copy region (SSC) of 18,409 bp, which were separated by a pair of 26,499 bp inverted repeat regions (IRs). The overall GC content was 38.10%. The genome contained 132 genes, including 87 protein-coding genes, 37 tRNA genes, and 8 rRNA genes. Further, phylogenetic analysis suggested that the V. odoratissinum has a close relationship with Viburnum betulifolium, which belong to Adoxaceae. |
| first_indexed | 2024-03-11T13:14:48Z |
| format | Article |
| id | doaj.art-82fdc6b53df14cf2a024e36132594d1f |
| institution | Directory Open Access Journal |
| issn | 2380-2359 |
| language | English |
| last_indexed | 2024-03-11T13:14:48Z |
| publishDate | 2020-04-01 |
| publisher | Taylor & Francis Group |
| record_format | Article |
| series | Mitochondrial DNA. Part B. Resources |
| spelling | doaj.art-82fdc6b53df14cf2a024e36132594d1f2023-11-03T13:50:20ZengTaylor & Francis GroupMitochondrial DNA. Part B. Resources2380-23592020-04-01521897189810.1080/23802359.2020.17528361752836The complete chloroplast genome sequence of Viburnum odoratissinumYing Wang0Chengjie Guo1Xingya Wang2Zhejiang Chinese Medical UniversityZhejiang Chinese Medical UniversityZhejiang Chinese Medical UniversityViburnum odoratissinum has very high ornamental and medicinal value. In this study, the chloroplast (cp) genome sequence of V. odoratissinum was characterized using Illumina pair-end sequencing. The complete cp genome was 158,757 bp in length, containing a large single-copy region (LSC) of 87,350 bp and a small single-copy region (SSC) of 18,409 bp, which were separated by a pair of 26,499 bp inverted repeat regions (IRs). The overall GC content was 38.10%. The genome contained 132 genes, including 87 protein-coding genes, 37 tRNA genes, and 8 rRNA genes. Further, phylogenetic analysis suggested that the V. odoratissinum has a close relationship with Viburnum betulifolium, which belong to Adoxaceae.http://dx.doi.org/10.1080/23802359.2020.1752836viburnum odoratissinumchloroplast genomephylogenetic analysis |
| spellingShingle | Ying Wang Chengjie Guo Xingya Wang The complete chloroplast genome sequence of Viburnum odoratissinum Mitochondrial DNA. Part B. Resources viburnum odoratissinum chloroplast genome phylogenetic analysis |
| title | The complete chloroplast genome sequence of Viburnum odoratissinum |
| title_full | The complete chloroplast genome sequence of Viburnum odoratissinum |
| title_fullStr | The complete chloroplast genome sequence of Viburnum odoratissinum |
| title_full_unstemmed | The complete chloroplast genome sequence of Viburnum odoratissinum |
| title_short | The complete chloroplast genome sequence of Viburnum odoratissinum |
| title_sort | complete chloroplast genome sequence of viburnum odoratissinum |
| topic | viburnum odoratissinum chloroplast genome phylogenetic analysis |
| url | http://dx.doi.org/10.1080/23802359.2020.1752836 |
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