Genetic typing of <i>Vibrio cholerae</i> strains biovar El Tor isolated from the Caucasus region during the 1970–1998 period using MLVA-5 and wgSNP

Genetic typing of <i>Vibrio cholerae</i> strains biovar El Tor isolated from the Caucasus region during the 1970–1998 period using MLVA-5 and wgSNP

Aim. Our aim was to perform phylogenetic analysis of Vibrio cholerae O1 El Tor biovar strains, isolated from the Caucasus region over the years, using MLVA and wgSNP methods.Materials and methods. We studied genomic sequences of 16 clinical V. cholerae O1 strains of El Tor biovar isolated on the ter...

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Bibliographic Details
Main Authors: D. A. Kovalev, N. A. Shapakov, S. V. Pisarenko, I. V. Savel’eva, O. V. Vasil’eva, V. N. Savel’ev, Yu. V. Siritsa, A. M. Zhirov, D. V. Ul’shina, I. V. Kuznetsova, O. V. Bobrysheva, A. N. Kulichenko
Format: Article
Language:Russian
Published: Central Research Institute for Epidemiology 2021-03-01
Series:Журнал микробиологии, эпидемиологии и иммунобиологии
Subjects:
whole genome sequencing
phylogenetic analysis
vibrio cholerae
mlva
wgsnp
Online Access:https://microbiol.elpub.ru/jour/article/view/987

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