Complete plastome sequence of Limonium aureum, a medicinal and ornamental species in China
Limonium aureum is a perennial herb of Plumbaginaceae, and draw the attention of researchers by its medicinal and ecological value. In this study, we first report the complete chloroplast genome of L. aureum with paired-end sequencing method. The results showed that the complete chloroplast genome o...
| Main Authors: | , , |
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| Format: | Article |
| Language: | English |
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Taylor & Francis Group
2020-01-01
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| Series: | Mitochondrial DNA. Part B. Resources |
| Subjects: | |
| Online Access: | http://dx.doi.org/10.1080/23802359.2019.1703608 |
| _version_ | 1797639504702472192 |
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| author | Xiaoyin Zhang Yao Xu Xiao Liu |
| author_facet | Xiaoyin Zhang Yao Xu Xiao Liu |
| author_sort | Xiaoyin Zhang |
| collection | DOAJ |
| description | Limonium aureum is a perennial herb of Plumbaginaceae, and draw the attention of researchers by its medicinal and ecological value. In this study, we first report the complete chloroplast genome of L. aureum with paired-end sequencing method. The results showed that the complete chloroplast genome of L. aureum is 154,661 bp in length with a typical quadripartite structure, including a large single-copy region (LSC, 84,545 bp), a single-copy region (SSC, 12, 980 bp), and a pair of inverted repeats (IRs, 28,568 bp). There are 113 annotated genes, consisting of 79 unique protein-coding genes, 4 unique ribosomal RNA genes, and 30 transfer RNA genes. Moreover, we constructed a phylogenetic tree with L. aureum and other 34 species based on their complete chloroplast genomes. And the results of the phylogenetic topologies displayed that Plumbago auriculata was closely related to L. aureum. Our results will contribute to the better study and make use of the species. |
| first_indexed | 2024-03-11T13:17:38Z |
| format | Article |
| id | doaj.art-83f852025a0d49f185110f2a9afdb66b |
| institution | Directory Open Access Journal |
| issn | 2380-2359 |
| language | English |
| last_indexed | 2024-03-11T13:17:38Z |
| publishDate | 2020-01-01 |
| publisher | Taylor & Francis Group |
| record_format | Article |
| series | Mitochondrial DNA. Part B. Resources |
| spelling | doaj.art-83f852025a0d49f185110f2a9afdb66b2023-11-03T11:00:19ZengTaylor & Francis GroupMitochondrial DNA. Part B. Resources2380-23592020-01-015133333410.1080/23802359.2019.17036081703608Complete plastome sequence of Limonium aureum, a medicinal and ornamental species in ChinaXiaoyin Zhang0Yao Xu1Xiao Liu2Key Laboratory of Resource Biology and Biotechnology in Western China, Ministry of Education, Northwest UniversityKey Laboratory of Resource Biology and Biotechnology in Western China, Ministry of Education, Northwest UniversityKey Laboratory of Resource Biology and Biotechnology in Western China, Ministry of Education, Northwest UniversityLimonium aureum is a perennial herb of Plumbaginaceae, and draw the attention of researchers by its medicinal and ecological value. In this study, we first report the complete chloroplast genome of L. aureum with paired-end sequencing method. The results showed that the complete chloroplast genome of L. aureum is 154,661 bp in length with a typical quadripartite structure, including a large single-copy region (LSC, 84,545 bp), a single-copy region (SSC, 12, 980 bp), and a pair of inverted repeats (IRs, 28,568 bp). There are 113 annotated genes, consisting of 79 unique protein-coding genes, 4 unique ribosomal RNA genes, and 30 transfer RNA genes. Moreover, we constructed a phylogenetic tree with L. aureum and other 34 species based on their complete chloroplast genomes. And the results of the phylogenetic topologies displayed that Plumbago auriculata was closely related to L. aureum. Our results will contribute to the better study and make use of the species.http://dx.doi.org/10.1080/23802359.2019.1703608limonium aureumchloroplast genomephylogenetic analysis |
| spellingShingle | Xiaoyin Zhang Yao Xu Xiao Liu Complete plastome sequence of Limonium aureum, a medicinal and ornamental species in China Mitochondrial DNA. Part B. Resources limonium aureum chloroplast genome phylogenetic analysis |
| title | Complete plastome sequence of Limonium aureum, a medicinal and ornamental species in China |
| title_full | Complete plastome sequence of Limonium aureum, a medicinal and ornamental species in China |
| title_fullStr | Complete plastome sequence of Limonium aureum, a medicinal and ornamental species in China |
| title_full_unstemmed | Complete plastome sequence of Limonium aureum, a medicinal and ornamental species in China |
| title_short | Complete plastome sequence of Limonium aureum, a medicinal and ornamental species in China |
| title_sort | complete plastome sequence of limonium aureum a medicinal and ornamental species in china |
| topic | limonium aureum chloroplast genome phylogenetic analysis |
| url | http://dx.doi.org/10.1080/23802359.2019.1703608 |
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