The complete mitochondrial genome of the Hainan Island Shrew, Crocidura wuchihensis
The Hainan Island Shrew Crocidura wuchihensis is a small-bodied insectivore species belonging to the Soricidae family. In this study, we determined its the complete mitochondrial genome. The whole mitochondrial genome was found to be 17,253 bp in length and comprises 13 protein-coding genes, 22 tRNA...
| Main Authors: | , , |
|---|---|
| Format: | Article |
| Language: | English |
| Published: |
Taylor & Francis Group
2023-09-01
|
| Series: | Mitochondrial DNA. Part B. Resources |
| Subjects: | |
| Online Access: | http://dx.doi.org/10.1080/23802359.2023.2256054 |
| _version_ | 1827772099540811776 |
|---|---|
| author | Feiyun Tu Xiaodan Hou Yi Wang |
| author_facet | Feiyun Tu Xiaodan Hou Yi Wang |
| author_sort | Feiyun Tu |
| collection | DOAJ |
| description | The Hainan Island Shrew Crocidura wuchihensis is a small-bodied insectivore species belonging to the Soricidae family. In this study, we determined its the complete mitochondrial genome. The whole mitochondrial genome was found to be 17,253 bp in length and comprises 13 protein-coding genes, 22 tRNAs, 2 rRNAs and a control region. The base composition of the C. wuchihensis total mitogenome as follows: A, 32.8%; G, 13.0%; T, 32.1%; and C, 22.1%, with an A + T content of 64.9%. Notably, a tandem repeat sequence (5′-CAC ACG TGT ACA-3′) was identified in the control region with 24 copy numbers. Additionally, phylogenetic analysis indicated that C. wuchihensis is closely related to Crocidura tanakae and Crocidura dongyangjiangensis based on the concatenated sequences of the 13 protein-coding genes. The characterization of the shrew’s mitogenome will provide the foundation for its use in population genomics and systematic studies of Soricidae. |
| first_indexed | 2024-03-11T13:03:35Z |
| format | Article |
| id | doaj.art-84e13fd047874bf0b817b3a586607ba6 |
| institution | Directory Open Access Journal |
| issn | 2380-2359 |
| language | English |
| last_indexed | 2024-03-11T13:03:35Z |
| publishDate | 2023-09-01 |
| publisher | Taylor & Francis Group |
| record_format | Article |
| series | Mitochondrial DNA. Part B. Resources |
| spelling | doaj.art-84e13fd047874bf0b817b3a586607ba62023-11-03T14:44:08ZengTaylor & Francis GroupMitochondrial DNA. Part B. Resources2380-23592023-09-018997397610.1080/23802359.2023.22560542256054The complete mitochondrial genome of the Hainan Island Shrew, Crocidura wuchihensisFeiyun Tu0Xiaodan Hou1Yi Wang2Ministry of Education Key Laboratory for Ecology of Tropical Islands, Key Laboratory of Tropical Animal and Plant Ecology of Hainan Province, College of Life Sciences, Hainan Normal UniversityMinistry of Education Key Laboratory for Ecology of Tropical Islands, Key Laboratory of Tropical Animal and Plant Ecology of Hainan Province, College of Life Sciences, Hainan Normal UniversityMinistry of Education Key Laboratory for Ecology of Tropical Islands, Key Laboratory of Tropical Animal and Plant Ecology of Hainan Province, College of Life Sciences, Hainan Normal UniversityThe Hainan Island Shrew Crocidura wuchihensis is a small-bodied insectivore species belonging to the Soricidae family. In this study, we determined its the complete mitochondrial genome. The whole mitochondrial genome was found to be 17,253 bp in length and comprises 13 protein-coding genes, 22 tRNAs, 2 rRNAs and a control region. The base composition of the C. wuchihensis total mitogenome as follows: A, 32.8%; G, 13.0%; T, 32.1%; and C, 22.1%, with an A + T content of 64.9%. Notably, a tandem repeat sequence (5′-CAC ACG TGT ACA-3′) was identified in the control region with 24 copy numbers. Additionally, phylogenetic analysis indicated that C. wuchihensis is closely related to Crocidura tanakae and Crocidura dongyangjiangensis based on the concatenated sequences of the 13 protein-coding genes. The characterization of the shrew’s mitogenome will provide the foundation for its use in population genomics and systematic studies of Soricidae.http://dx.doi.org/10.1080/23802359.2023.2256054crocidura wuchihensismitochondrial genomephylogenysoricidae |
| spellingShingle | Feiyun Tu Xiaodan Hou Yi Wang The complete mitochondrial genome of the Hainan Island Shrew, Crocidura wuchihensis Mitochondrial DNA. Part B. Resources crocidura wuchihensis mitochondrial genome phylogeny soricidae |
| title | The complete mitochondrial genome of the Hainan Island Shrew, Crocidura wuchihensis |
| title_full | The complete mitochondrial genome of the Hainan Island Shrew, Crocidura wuchihensis |
| title_fullStr | The complete mitochondrial genome of the Hainan Island Shrew, Crocidura wuchihensis |
| title_full_unstemmed | The complete mitochondrial genome of the Hainan Island Shrew, Crocidura wuchihensis |
| title_short | The complete mitochondrial genome of the Hainan Island Shrew, Crocidura wuchihensis |
| title_sort | complete mitochondrial genome of the hainan island shrew crocidura wuchihensis |
| topic | crocidura wuchihensis mitochondrial genome phylogeny soricidae |
| url | http://dx.doi.org/10.1080/23802359.2023.2256054 |
| work_keys_str_mv | AT feiyuntu thecompletemitochondrialgenomeofthehainanislandshrewcrocidurawuchihensis AT xiaodanhou thecompletemitochondrialgenomeofthehainanislandshrewcrocidurawuchihensis AT yiwang thecompletemitochondrialgenomeofthehainanislandshrewcrocidurawuchihensis AT feiyuntu completemitochondrialgenomeofthehainanislandshrewcrocidurawuchihensis AT xiaodanhou completemitochondrialgenomeofthehainanislandshrewcrocidurawuchihensis AT yiwang completemitochondrialgenomeofthehainanislandshrewcrocidurawuchihensis |