Structural mechanism of intracellular autoregulation of zinc uptake in ZIP transporters

Abstract Zinc is an essential micronutrient that supports all living organisms through regulating numerous biological processes. However, the mechanism of uptake regulation by intracellular Zn2+ status remains unclear. Here we report a cryo-electron microscopy structure of a ZIP-family transporter f...

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Main Authors: Changxu Pang, Jin Chai, Ping Zhu, John Shanklin, Qun Liu
Format: Article
Language:English
Published: Nature Portfolio 2023-06-01
Series:Nature Communications
Online Access:https://doi.org/10.1038/s41467-023-39010-6
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author Changxu Pang
Jin Chai
Ping Zhu
John Shanklin
Qun Liu
author_facet Changxu Pang
Jin Chai
Ping Zhu
John Shanklin
Qun Liu
author_sort Changxu Pang
collection DOAJ
description Abstract Zinc is an essential micronutrient that supports all living organisms through regulating numerous biological processes. However, the mechanism of uptake regulation by intracellular Zn2+ status remains unclear. Here we report a cryo-electron microscopy structure of a ZIP-family transporter from Bordetella bronchiseptica at 3.05 Å resolution in an inward-facing, inhibited conformation. The transporter forms a homodimer, each protomer containing nine transmembrane helices and three metal ions. Two metal ions form a binuclear pore structure, and the third ion is located at an egress site facing the cytoplasm. The egress site is covered by a loop, and two histidine residues on the loop interact with the egress-site ion and regulate its release. Cell-based Zn2+ uptake and cell growth viability assays reveal a negative regulation of Zn2+ uptake through sensing intracellular Zn2+ status using a built-in sensor. These structural and biochemical analyses provide mechanistic insight into the autoregulation of zinc uptake across membranes.
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spelling doaj.art-85ee236294074551ab3e0ac75f34941e2023-06-11T11:19:48ZengNature PortfolioNature Communications2041-17232023-06-0114111010.1038/s41467-023-39010-6Structural mechanism of intracellular autoregulation of zinc uptake in ZIP transportersChangxu Pang0Jin Chai1Ping Zhu2John Shanklin3Qun Liu4Biology Department, Brookhaven National LaboratoryBiology Department, Brookhaven National LaboratoryBiology Department, Brookhaven National LaboratoryBiology Department, Brookhaven National LaboratoryBiology Department, Brookhaven National LaboratoryAbstract Zinc is an essential micronutrient that supports all living organisms through regulating numerous biological processes. However, the mechanism of uptake regulation by intracellular Zn2+ status remains unclear. Here we report a cryo-electron microscopy structure of a ZIP-family transporter from Bordetella bronchiseptica at 3.05 Å resolution in an inward-facing, inhibited conformation. The transporter forms a homodimer, each protomer containing nine transmembrane helices and three metal ions. Two metal ions form a binuclear pore structure, and the third ion is located at an egress site facing the cytoplasm. The egress site is covered by a loop, and two histidine residues on the loop interact with the egress-site ion and regulate its release. Cell-based Zn2+ uptake and cell growth viability assays reveal a negative regulation of Zn2+ uptake through sensing intracellular Zn2+ status using a built-in sensor. These structural and biochemical analyses provide mechanistic insight into the autoregulation of zinc uptake across membranes.https://doi.org/10.1038/s41467-023-39010-6
spellingShingle Changxu Pang
Jin Chai
Ping Zhu
John Shanklin
Qun Liu
Structural mechanism of intracellular autoregulation of zinc uptake in ZIP transporters
Nature Communications
title Structural mechanism of intracellular autoregulation of zinc uptake in ZIP transporters
title_full Structural mechanism of intracellular autoregulation of zinc uptake in ZIP transporters
title_fullStr Structural mechanism of intracellular autoregulation of zinc uptake in ZIP transporters
title_full_unstemmed Structural mechanism of intracellular autoregulation of zinc uptake in ZIP transporters
title_short Structural mechanism of intracellular autoregulation of zinc uptake in ZIP transporters
title_sort structural mechanism of intracellular autoregulation of zinc uptake in zip transporters
url https://doi.org/10.1038/s41467-023-39010-6
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