Complete plastid genome of Cheirostylis chinensis (Orchidaceae, Goodyerinae)
The first complete plastid genome of Cheirostylis, Ch. chinensis, was assembled and analyzed in this study. The total genome was 147,218 bp in length, consisting of a large single-copy region (LSC) of 81,081 bp, a small single-copy region (SSC) of 14,769 bp, and two inverted repeat regions (IRA and...
| Main Authors: | , , , |
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| Format: | Article |
| Language: | English |
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Taylor & Francis Group
2020-01-01
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| Series: | Mitochondrial DNA. Part B. Resources |
| Subjects: | |
| Online Access: | http://dx.doi.org/10.1080/23802359.2019.1698347 |
| _version_ | 1827773130160996352 |
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| author | Xiong-De Tu Sai Zhang Ding-Kun Liu Ming-He Li |
| author_facet | Xiong-De Tu Sai Zhang Ding-Kun Liu Ming-He Li |
| author_sort | Xiong-De Tu |
| collection | DOAJ |
| description | The first complete plastid genome of Cheirostylis, Ch. chinensis, was assembled and analyzed in this study. The total genome was 147,218 bp in length, consisting of a large single-copy region (LSC) of 81,081 bp, a small single-copy region (SSC) of 14,769 bp, and two inverted repeat regions (IRA and IRB) of 25,684 bp. The genome contained 131 genes, including 38 transfer RNA (tRNA) genes, 8 ribosomal RNA (rRNA) genes and 85 protein-coding genes. Phylogenomic analysis indicated that Ch. chinensis nested within Goodyerinae. |
| first_indexed | 2024-03-11T13:18:43Z |
| format | Article |
| id | doaj.art-8625038cbaf3450492a981deea424eb7 |
| institution | Directory Open Access Journal |
| issn | 2380-2359 |
| language | English |
| last_indexed | 2024-03-11T13:18:43Z |
| publishDate | 2020-01-01 |
| publisher | Taylor & Francis Group |
| record_format | Article |
| series | Mitochondrial DNA. Part B. Resources |
| spelling | doaj.art-8625038cbaf3450492a981deea424eb72023-11-03T10:38:53ZengTaylor & Francis GroupMitochondrial DNA. Part B. Resources2380-23592020-01-015112712810.1080/23802359.2019.16983471698347Complete plastid genome of Cheirostylis chinensis (Orchidaceae, Goodyerinae)Xiong-De Tu0Sai Zhang1Ding-Kun Liu2Ming-He Li3Key Laboratory of National Forestry and Grassland Administration for Orchid Conservation and Utilization at College of Landscape Architecture, Fujian Agriculture and Forestry UniversityFujian Colleges and Universities Engineering Research Institute of Conservation and Utilization of Natural Bioresources at College of Forestry, Fujian Agriculture and Forestry UniversityKey Laboratory of National Forestry and Grassland Administration for Orchid Conservation and Utilization at College of Landscape Architecture, Fujian Agriculture and Forestry UniversityKey Laboratory of National Forestry and Grassland Administration for Orchid Conservation and Utilization at College of Landscape Architecture, Fujian Agriculture and Forestry UniversityThe first complete plastid genome of Cheirostylis, Ch. chinensis, was assembled and analyzed in this study. The total genome was 147,218 bp in length, consisting of a large single-copy region (LSC) of 81,081 bp, a small single-copy region (SSC) of 14,769 bp, and two inverted repeat regions (IRA and IRB) of 25,684 bp. The genome contained 131 genes, including 38 transfer RNA (tRNA) genes, 8 ribosomal RNA (rRNA) genes and 85 protein-coding genes. Phylogenomic analysis indicated that Ch. chinensis nested within Goodyerinae.http://dx.doi.org/10.1080/23802359.2019.1698347chloroplast genomecranichideaeorchidoideaephylogeny |
| spellingShingle | Xiong-De Tu Sai Zhang Ding-Kun Liu Ming-He Li Complete plastid genome of Cheirostylis chinensis (Orchidaceae, Goodyerinae) Mitochondrial DNA. Part B. Resources chloroplast genome cranichideae orchidoideae phylogeny |
| title | Complete plastid genome of Cheirostylis chinensis (Orchidaceae, Goodyerinae) |
| title_full | Complete plastid genome of Cheirostylis chinensis (Orchidaceae, Goodyerinae) |
| title_fullStr | Complete plastid genome of Cheirostylis chinensis (Orchidaceae, Goodyerinae) |
| title_full_unstemmed | Complete plastid genome of Cheirostylis chinensis (Orchidaceae, Goodyerinae) |
| title_short | Complete plastid genome of Cheirostylis chinensis (Orchidaceae, Goodyerinae) |
| title_sort | complete plastid genome of cheirostylis chinensis orchidaceae goodyerinae |
| topic | chloroplast genome cranichideae orchidoideae phylogeny |
| url | http://dx.doi.org/10.1080/23802359.2019.1698347 |
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