A phylotranscriptomic dataset of angiosperm species under cold stress
Abstract Angiosperms are one of the most diverse and abundant plant groups that are widely distributed on Earth, from tropical to temperate and polar zones. The wide distribution of angiosperms may be attributed to the evolution of sophisticated mechanisms of environmental adaptability, including co...
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| Format: | Article |
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Nature Portfolio
2023-06-01
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| Series: | Scientific Data |
| Online Access: | https://doi.org/10.1038/s41597-023-02307-8 |
| _version_ | 1827917122617999360 |
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| author | Shuo Wang Yixian Zhang Xiaoxue Ye Yirong Shen Hua Liu Xijuan Zhao Liangyu Guo Lu Cao Yunfei Du Wenwu Wu |
| author_facet | Shuo Wang Yixian Zhang Xiaoxue Ye Yirong Shen Hua Liu Xijuan Zhao Liangyu Guo Lu Cao Yunfei Du Wenwu Wu |
| author_sort | Shuo Wang |
| collection | DOAJ |
| description | Abstract Angiosperms are one of the most diverse and abundant plant groups that are widely distributed on Earth, from tropical to temperate and polar zones. The wide distribution of angiosperms may be attributed to the evolution of sophisticated mechanisms of environmental adaptability, including cold tolerance. Since the development of high-throughput sequencing, transcriptome has been widely utilized to gain insights into the molecular mechanisms of plants in response to cold stress. However, previous studies generally focused on single or two species, and comparative transcriptome analyses for multispecies responding to cold stress were limited. In this study, we selected 11 representative angiosperm species, performed phylotranscriptome experiments at four time points before and after cold stress, and presented a profile of cold-induced transcriptome changes in angiosperms. Our multispecies cold-responsive RNA-seq datasets provide valuable references for exploring conserved and evolutionary mechanisms of angiosperms in adaptation to cold stress. |
| first_indexed | 2024-03-13T03:24:20Z |
| format | Article |
| id | doaj.art-8691d682c9764bc2814344c812c5e90e |
| institution | Directory Open Access Journal |
| issn | 2052-4463 |
| language | English |
| last_indexed | 2024-03-13T03:24:20Z |
| publishDate | 2023-06-01 |
| publisher | Nature Portfolio |
| record_format | Article |
| series | Scientific Data |
| spelling | doaj.art-8691d682c9764bc2814344c812c5e90e2023-06-25T11:08:40ZengNature PortfolioScientific Data2052-44632023-06-011011710.1038/s41597-023-02307-8A phylotranscriptomic dataset of angiosperm species under cold stressShuo Wang0Yixian Zhang1Xiaoxue Ye2Yirong Shen3Hua Liu4Xijuan Zhao5Liangyu Guo6Lu Cao7Yunfei Du8Wenwu Wu9State Key Laboratory of Subtropical Silviculture, Zhejiang A&F University, Lin’anState Key Laboratory of Subtropical Silviculture, Zhejiang A&F University, Lin’anSanya Research Institute of Chinese Academy of Tropical Agricultural SciencesState Key Laboratory of Subtropical Silviculture, Zhejiang A&F University, Lin’anState Key Laboratory of Subtropical Silviculture, Zhejiang A&F University, Lin’anState Key Laboratory of Subtropical Silviculture, Zhejiang A&F University, Lin’anState Key Laboratory of Subtropical Silviculture, Zhejiang A&F University, Lin’anState Key Laboratory of Subtropical Silviculture, Zhejiang A&F University, Lin’anState Key Laboratory of Subtropical Silviculture, Zhejiang A&F University, Lin’anState Key Laboratory of Subtropical Silviculture, Zhejiang A&F University, Lin’anAbstract Angiosperms are one of the most diverse and abundant plant groups that are widely distributed on Earth, from tropical to temperate and polar zones. The wide distribution of angiosperms may be attributed to the evolution of sophisticated mechanisms of environmental adaptability, including cold tolerance. Since the development of high-throughput sequencing, transcriptome has been widely utilized to gain insights into the molecular mechanisms of plants in response to cold stress. However, previous studies generally focused on single or two species, and comparative transcriptome analyses for multispecies responding to cold stress were limited. In this study, we selected 11 representative angiosperm species, performed phylotranscriptome experiments at four time points before and after cold stress, and presented a profile of cold-induced transcriptome changes in angiosperms. Our multispecies cold-responsive RNA-seq datasets provide valuable references for exploring conserved and evolutionary mechanisms of angiosperms in adaptation to cold stress.https://doi.org/10.1038/s41597-023-02307-8 |
| spellingShingle | Shuo Wang Yixian Zhang Xiaoxue Ye Yirong Shen Hua Liu Xijuan Zhao Liangyu Guo Lu Cao Yunfei Du Wenwu Wu A phylotranscriptomic dataset of angiosperm species under cold stress Scientific Data |
| title | A phylotranscriptomic dataset of angiosperm species under cold stress |
| title_full | A phylotranscriptomic dataset of angiosperm species under cold stress |
| title_fullStr | A phylotranscriptomic dataset of angiosperm species under cold stress |
| title_full_unstemmed | A phylotranscriptomic dataset of angiosperm species under cold stress |
| title_short | A phylotranscriptomic dataset of angiosperm species under cold stress |
| title_sort | phylotranscriptomic dataset of angiosperm species under cold stress |
| url | https://doi.org/10.1038/s41597-023-02307-8 |
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