Conclusive evidence for hexasomic inheritance in chrysanthemum based on analysis of a 183 k SNP array

Conclusive evidence for hexasomic inheritance in chrysanthemum based on analysis of a 183 k SNP array

Abstract Background Cultivated chrysanthemum is an outcrossing hexaploid (2n = 6× = 54) with a disputed mode of inheritance. In this paper, we present a single nucleotide polymorphism (SNP) selection pipeline that was used to design an Affymetrix Axiom array with 183 k SNPs from RNA sequencing data...

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Bibliographic Details
Main Authors: Geert van Geest, Roeland E Voorrips, Danny Esselink, Aike Post, Richard GF Visser, Paul Arens
Format: Article
Language:English
Published: BMC 2017-08-01
Series:BMC Genomics
Subjects:
Polyploid
SNP retrieval
Allelic expression bias
SNP array
RNA-seq
Polysomic
Online Access:http://link.springer.com/article/10.1186/s12864-017-4003-0

Internet

http://link.springer.com/article/10.1186/s12864-017-4003-0

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