The complete chloroplast genome of Sophora davidii (Fabaceae) and its phylogenetic implications
Sophora davidii (Franch.) Pavol. is a deciduous or evergreen shrubs belonging to the genus Sophora, Fabaceae. The roots of S. davidii have been traditionally used as a medicinal herb in China to clear internal heat, relieve sore throat, and reduce swelling. Here we sequenced the whole genome of the...
| Main Authors: | , , , , , , , |
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| Format: | Article |
| Language: | English |
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Taylor & Francis Group
2022-03-01
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| Series: | Mitochondrial DNA. Part B. Resources |
| Subjects: | |
| Online Access: | http://dx.doi.org/10.1080/23802359.2021.1999187 |
| _version_ | 1797638720409567232 |
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| author | Huigai Sun Xiaowei Han Donglai Ma Yang Li Tian Kang Ruipeng Sun Yuguang Zheng Junna Song |
| author_facet | Huigai Sun Xiaowei Han Donglai Ma Yang Li Tian Kang Ruipeng Sun Yuguang Zheng Junna Song |
| author_sort | Huigai Sun |
| collection | DOAJ |
| description | Sophora davidii (Franch.) Pavol. is a deciduous or evergreen shrubs belonging to the genus Sophora, Fabaceae. The roots of S. davidii have been traditionally used as a medicinal herb in China to clear internal heat, relieve sore throat, and reduce swelling. Here we sequenced the whole genome of the chloroplast of S. davidii. The complete length of the chloroplast genome in S. davidii is 153,584 bp, containing a large single-copy region of 83,930 bp, a small single-copy region of 15,008 bp, and a pair of inverted repeats regions of 25,823 bp. The total guanine-cytosine (GC) percentage of the chloroplast genome was 36.7%. A total of 131 genes were annotated from the chloroplast genome of S. davidii, including 85 protein-coding genes, 8 rRNA genes and 38 tRNA genes. The phylogenetic analysis showed that S. davidii is closely related to the other three species of genus Sophora. |
| first_indexed | 2024-03-11T13:06:36Z |
| format | Article |
| id | doaj.art-87e410d6f51f48d498e406f2cf8a2438 |
| institution | Directory Open Access Journal |
| issn | 2380-2359 |
| language | English |
| last_indexed | 2024-03-11T13:06:36Z |
| publishDate | 2022-03-01 |
| publisher | Taylor & Francis Group |
| record_format | Article |
| series | Mitochondrial DNA. Part B. Resources |
| spelling | doaj.art-87e410d6f51f48d498e406f2cf8a24382023-11-03T14:36:00ZengTaylor & Francis GroupMitochondrial DNA. Part B. Resources2380-23592022-03-017350350410.1080/23802359.2021.19991871999187The complete chloroplast genome of Sophora davidii (Fabaceae) and its phylogenetic implicationsHuigai Sun0Xiaowei Han1Donglai Ma2Yang Li3Tian Kang4Ruipeng Sun5Yuguang Zheng6Junna Song7Traditional Chinese Medicine Processing Technology Innovation Center of Hebei Province, Hebei University of Chinese MedicineTraditional Chinese Medicine Processing Technology Innovation Center of Hebei Province, Hebei University of Chinese MedicineTraditional Chinese Medicine Processing Technology Innovation Center of Hebei Province, Hebei University of Chinese MedicineTraditional Chinese Medicine Processing Technology Innovation Center of Hebei Province, Hebei University of Chinese MedicinePeople’s Hospital of Shijiazhuang CityPeople’s Hospital of Shijiazhuang CityTraditional Chinese Medicine Processing Technology Innovation Center of Hebei Province, Hebei University of Chinese MedicineTraditional Chinese Medicine Processing Technology Innovation Center of Hebei Province, Hebei University of Chinese MedicineSophora davidii (Franch.) Pavol. is a deciduous or evergreen shrubs belonging to the genus Sophora, Fabaceae. The roots of S. davidii have been traditionally used as a medicinal herb in China to clear internal heat, relieve sore throat, and reduce swelling. Here we sequenced the whole genome of the chloroplast of S. davidii. The complete length of the chloroplast genome in S. davidii is 153,584 bp, containing a large single-copy region of 83,930 bp, a small single-copy region of 15,008 bp, and a pair of inverted repeats regions of 25,823 bp. The total guanine-cytosine (GC) percentage of the chloroplast genome was 36.7%. A total of 131 genes were annotated from the chloroplast genome of S. davidii, including 85 protein-coding genes, 8 rRNA genes and 38 tRNA genes. The phylogenetic analysis showed that S. davidii is closely related to the other three species of genus Sophora.http://dx.doi.org/10.1080/23802359.2021.1999187phylogenychloroplast genomesophora davidiifabaceae |
| spellingShingle | Huigai Sun Xiaowei Han Donglai Ma Yang Li Tian Kang Ruipeng Sun Yuguang Zheng Junna Song The complete chloroplast genome of Sophora davidii (Fabaceae) and its phylogenetic implications Mitochondrial DNA. Part B. Resources phylogeny chloroplast genome sophora davidii fabaceae |
| title | The complete chloroplast genome of Sophora davidii (Fabaceae) and its phylogenetic implications |
| title_full | The complete chloroplast genome of Sophora davidii (Fabaceae) and its phylogenetic implications |
| title_fullStr | The complete chloroplast genome of Sophora davidii (Fabaceae) and its phylogenetic implications |
| title_full_unstemmed | The complete chloroplast genome of Sophora davidii (Fabaceae) and its phylogenetic implications |
| title_short | The complete chloroplast genome of Sophora davidii (Fabaceae) and its phylogenetic implications |
| title_sort | complete chloroplast genome of sophora davidii fabaceae and its phylogenetic implications |
| topic | phylogeny chloroplast genome sophora davidii fabaceae |
| url | http://dx.doi.org/10.1080/23802359.2021.1999187 |
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