Identification of Circular RNA Profiles in the Liver of Diet-Induced Obese Mice and Construction of the ceRNA Network

Obesity is a major risk factor for cardiovascular, cerebrovascular, metabolic, and respiratory diseases, and it has become an important social health problem affecting the health of the population. Obesity is affected by both genetic and environmental factors. In this study, we constructed a diet-in...

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Bibliographic Details
Main Authors: Xiaoxiao Zhang, Shuhua Gu, Shunyi Shen, Tao Luo, Haiyi Zhao, Sijia Liu, Jingjie Feng, Maosheng Yang, Laqi Yi, Zhaohan Fan, Yu Liu, Rui Han
Format: Article
Language:English
Published: MDPI AG 2023-03-01
Series:Genes
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Online Access:https://www.mdpi.com/2073-4425/14/3/688
Description
Summary:Obesity is a major risk factor for cardiovascular, cerebrovascular, metabolic, and respiratory diseases, and it has become an important social health problem affecting the health of the population. Obesity is affected by both genetic and environmental factors. In this study, we constructed a diet-induced obese C57BL/6J mouse model and performed deep RNA sequencing (RNA-seq) on liner-depleted RNA extracted from the liver tissues of the mice to explore the underlying mechanisms of obesity. A total of 7469 circular RNAs (circRNAs) were detected, and 21 were differentially expressed (DE) in the high-fat diet (HFD) and low-fat diet (LFD) groups. We then constructed a comprehensive circRNA-associated competing endogenous RNA (ceRNA) network. Bioinformatic analysis indicated that DE circRNAs associated with lipid metabolic-related pathways may act as miRNA sponges to modulate target gene expression. <i>CircRNA1709</i> and <i>circRNA4842</i> may serve as new candidates to regulate the expression of <i>PTEN</i>. This study provides systematic circRNA-associated ceRNA profiling in HFD mouse liver, and the results can aid early diagnosis and the selection of treatment targets for obesity in the future.
ISSN:2073-4425