Metagenomic data of vertical distribution and abundance of bacterial diversity in the hypersaline sediments of Mad Boon-mangrove ecosystem, Bay of Bengal
Bacterial diversity studies in hypersaline soil often yield novel organisms and contribute to our understanding of this extreme environment. Soil from Mad Boon is previously uncharacterized, with dense mangrove forest in one side and hypersaline soil in another side of backwater located in Southeast...
| Main Authors: | , , , |
|---|---|
| Format: | Article |
| Language: | English |
| Published: |
Elsevier
2019-02-01
|
| Series: | Data in Brief |
| Online Access: | http://www.sciencedirect.com/science/article/pii/S2352340918315671 |
| _version_ | 1819118703066742784 |
|---|---|
| author | Balamurugan Sadaiappan Chinnamani Prasannakumar Kumaran Subramanian Mahendran Subramanian |
| author_facet | Balamurugan Sadaiappan Chinnamani Prasannakumar Kumaran Subramanian Mahendran Subramanian |
| author_sort | Balamurugan Sadaiappan |
| collection | DOAJ |
| description | Bacterial diversity studies in hypersaline soil often yield novel organisms and contribute to our understanding of this extreme environment. Soil from Mad Boon is previously uncharacterized, with dense mangrove forest in one side and hypersaline soil in another side of backwater located in Southeast coast of Tamil Nadu, India. We surveyed to characterize the structure and diversity of the bacterial community. Samples were collected in a partially vegetated upland, exposed backwater sedimentation and water-logged location. In this study, we investigate the bacterial community structure using pyrosequence analysis of the V5- V9 gene region. After quality checks a total of 3919, 7298 and 7399 reads were obtained. About 42 phyla were observed, among them Proteobacteria were dominant phylum followed by Acidobacteria, Firmicutes and Chloroflexi. Classes including Deltaproteobacteria and Gammaproteobacteriawere observed. All sequences generated in this study were submitted to NCBI SRA under the accession numbers SRR627695, SRR63011 and SRR631012. |
| first_indexed | 2024-12-22T05:53:05Z |
| format | Article |
| id | doaj.art-883a6e8d5936480ea6aaaa158c3d58b8 |
| institution | Directory Open Access Journal |
| issn | 2352-3409 |
| language | English |
| last_indexed | 2024-12-22T05:53:05Z |
| publishDate | 2019-02-01 |
| publisher | Elsevier |
| record_format | Article |
| series | Data in Brief |
| spelling | doaj.art-883a6e8d5936480ea6aaaa158c3d58b82022-12-21T18:36:50ZengElsevierData in Brief2352-34092019-02-0122716721Metagenomic data of vertical distribution and abundance of bacterial diversity in the hypersaline sediments of Mad Boon-mangrove ecosystem, Bay of BengalBalamurugan Sadaiappan0Chinnamani Prasannakumar1Kumaran Subramanian2Mahendran Subramanian3Centre for Advanced Studies in Marine Biology, Annamalai University, India; Centre for Marine and Coastal Studies, Madurai Kamaraj University, IndiaCentre for Advanced Studies in Marine Biology, Annamalai University, IndiaCentre for Advanced Studies in Marine Biology, Annamalai University, IndiaCentre for Marine and Coastal Studies, Madurai Kamaraj University, India; Corresponding author.Bacterial diversity studies in hypersaline soil often yield novel organisms and contribute to our understanding of this extreme environment. Soil from Mad Boon is previously uncharacterized, with dense mangrove forest in one side and hypersaline soil in another side of backwater located in Southeast coast of Tamil Nadu, India. We surveyed to characterize the structure and diversity of the bacterial community. Samples were collected in a partially vegetated upland, exposed backwater sedimentation and water-logged location. In this study, we investigate the bacterial community structure using pyrosequence analysis of the V5- V9 gene region. After quality checks a total of 3919, 7298 and 7399 reads were obtained. About 42 phyla were observed, among them Proteobacteria were dominant phylum followed by Acidobacteria, Firmicutes and Chloroflexi. Classes including Deltaproteobacteria and Gammaproteobacteriawere observed. All sequences generated in this study were submitted to NCBI SRA under the accession numbers SRR627695, SRR63011 and SRR631012.http://www.sciencedirect.com/science/article/pii/S2352340918315671 |
| spellingShingle | Balamurugan Sadaiappan Chinnamani Prasannakumar Kumaran Subramanian Mahendran Subramanian Metagenomic data of vertical distribution and abundance of bacterial diversity in the hypersaline sediments of Mad Boon-mangrove ecosystem, Bay of Bengal Data in Brief |
| title | Metagenomic data of vertical distribution and abundance of bacterial diversity in the hypersaline sediments of Mad Boon-mangrove ecosystem, Bay of Bengal |
| title_full | Metagenomic data of vertical distribution and abundance of bacterial diversity in the hypersaline sediments of Mad Boon-mangrove ecosystem, Bay of Bengal |
| title_fullStr | Metagenomic data of vertical distribution and abundance of bacterial diversity in the hypersaline sediments of Mad Boon-mangrove ecosystem, Bay of Bengal |
| title_full_unstemmed | Metagenomic data of vertical distribution and abundance of bacterial diversity in the hypersaline sediments of Mad Boon-mangrove ecosystem, Bay of Bengal |
| title_short | Metagenomic data of vertical distribution and abundance of bacterial diversity in the hypersaline sediments of Mad Boon-mangrove ecosystem, Bay of Bengal |
| title_sort | metagenomic data of vertical distribution and abundance of bacterial diversity in the hypersaline sediments of mad boon mangrove ecosystem bay of bengal |
| url | http://www.sciencedirect.com/science/article/pii/S2352340918315671 |
| work_keys_str_mv | AT balamurugansadaiappan metagenomicdataofverticaldistributionandabundanceofbacterialdiversityinthehypersalinesedimentsofmadboonmangroveecosystembayofbengal AT chinnamaniprasannakumar metagenomicdataofverticaldistributionandabundanceofbacterialdiversityinthehypersalinesedimentsofmadboonmangroveecosystembayofbengal AT kumaransubramanian metagenomicdataofverticaldistributionandabundanceofbacterialdiversityinthehypersalinesedimentsofmadboonmangroveecosystembayofbengal AT mahendransubramanian metagenomicdataofverticaldistributionandabundanceofbacterialdiversityinthehypersalinesedimentsofmadboonmangroveecosystembayofbengal |