The complete chloroplast genome of Actinidia valvata (Actinidiaceae)
The complete chloroplast (cp) genome of Actinidia valvata (A. valvata) was sequenced and assembled into a circular genome of 156,548 bp in length using Illumina paired-end data. The genome consisted of a pair of inverted repeats (IR) (23,378 bp each) separating two single-copy regions, the large sin...
| Main Authors: | , , |
|---|---|
| Format: | Article |
| Language: | English |
| Published: |
Taylor & Francis Group
2020-04-01
|
| Series: | Mitochondrial DNA. Part B. Resources |
| Subjects: | |
| Online Access: | http://dx.doi.org/10.1080/23802359.2020.1745105 |
| _version_ | 1797639299978493952 |
|---|---|
| author | Haifeng Lin Yiqing Xu Di Bai |
| author_facet | Haifeng Lin Yiqing Xu Di Bai |
| author_sort | Haifeng Lin |
| collection | DOAJ |
| description | The complete chloroplast (cp) genome of Actinidia valvata (A. valvata) was sequenced and assembled into a circular genome of 156,548 bp in length using Illumina paired-end data. The genome consisted of a pair of inverted repeats (IR) (23,378 bp each) separating two single-copy regions, the large single-copy region (LSC) 88,397 bp and the small single-copy region (SSC) 21,395 bp. The cp genome encoded a total of 131 genes, including 85 protein-coding genes, 38 tRNA genes, and 8 rRNA genes. The phylogenetic analysis showed that A. valvata was sister to Actinidia tetramera (A. tetramera). |
| first_indexed | 2024-03-11T13:14:49Z |
| format | Article |
| id | doaj.art-88437798d33b4b4a8bde0a7031b6b380 |
| institution | Directory Open Access Journal |
| issn | 2380-2359 |
| language | English |
| last_indexed | 2024-03-11T13:14:49Z |
| publishDate | 2020-04-01 |
| publisher | Taylor & Francis Group |
| record_format | Article |
| series | Mitochondrial DNA. Part B. Resources |
| spelling | doaj.art-88437798d33b4b4a8bde0a7031b6b3802023-11-03T13:50:19ZengTaylor & Francis GroupMitochondrial DNA. Part B. Resources2380-23592020-04-01521607160810.1080/23802359.2020.17451051745105The complete chloroplast genome of Actinidia valvata (Actinidiaceae)Haifeng Lin0Yiqing Xu1Di Bai2Nanjing Forestry UniversityNanjing Forestry UniversityNanjing Agricultural UniversityThe complete chloroplast (cp) genome of Actinidia valvata (A. valvata) was sequenced and assembled into a circular genome of 156,548 bp in length using Illumina paired-end data. The genome consisted of a pair of inverted repeats (IR) (23,378 bp each) separating two single-copy regions, the large single-copy region (LSC) 88,397 bp and the small single-copy region (SSC) 21,395 bp. The cp genome encoded a total of 131 genes, including 85 protein-coding genes, 38 tRNA genes, and 8 rRNA genes. The phylogenetic analysis showed that A. valvata was sister to Actinidia tetramera (A. tetramera).http://dx.doi.org/10.1080/23802359.2020.1745105actinidiaceaeactinidia valvatachloroplast genomephylogeny |
| spellingShingle | Haifeng Lin Yiqing Xu Di Bai The complete chloroplast genome of Actinidia valvata (Actinidiaceae) Mitochondrial DNA. Part B. Resources actinidiaceae actinidia valvata chloroplast genome phylogeny |
| title | The complete chloroplast genome of Actinidia valvata (Actinidiaceae) |
| title_full | The complete chloroplast genome of Actinidia valvata (Actinidiaceae) |
| title_fullStr | The complete chloroplast genome of Actinidia valvata (Actinidiaceae) |
| title_full_unstemmed | The complete chloroplast genome of Actinidia valvata (Actinidiaceae) |
| title_short | The complete chloroplast genome of Actinidia valvata (Actinidiaceae) |
| title_sort | complete chloroplast genome of actinidia valvata actinidiaceae |
| topic | actinidiaceae actinidia valvata chloroplast genome phylogeny |
| url | http://dx.doi.org/10.1080/23802359.2020.1745105 |
| work_keys_str_mv | AT haifenglin thecompletechloroplastgenomeofactinidiavalvataactinidiaceae AT yiqingxu thecompletechloroplastgenomeofactinidiavalvataactinidiaceae AT dibai thecompletechloroplastgenomeofactinidiavalvataactinidiaceae AT haifenglin completechloroplastgenomeofactinidiavalvataactinidiaceae AT yiqingxu completechloroplastgenomeofactinidiavalvataactinidiaceae AT dibai completechloroplastgenomeofactinidiavalvataactinidiaceae |