Pangenomic genotyping with the marker array
Abstract We present a new method and software tool called rowbowt that applies a pangenome index to the problem of inferring genotypes from short-read sequencing data. The method uses a novel indexing structure called the marker array. Using the marker array, we can genotype variants with respect fr...
| Hlavní autoři: | , , |
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| Médium: | Článek |
| Jazyk: | English |
| Vydáno: |
BMC
2023-05-01
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| Edice: | Algorithms for Molecular Biology |
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| On-line přístup: | https://doi.org/10.1186/s13015-023-00225-3 |