The complete chloroplast genome of Torilis scabra (Apiaceae)
Torilis scabra (Thunb.) DC. is widely distributed in China and Japan and has been introduced to North America. In this study, the complete chloroplast genome sequence of the T. scabra was obtained by de novo assembly using the NGS data. The chloroplast genome of T. scabra was 157,855 bp in length an...
| Main Authors: | , , |
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| Format: | Article |
| Language: | English |
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Taylor & Francis Group
2019-07-01
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| Series: | Mitochondrial DNA. Part B. Resources |
| Subjects: | |
| Online Access: | http://dx.doi.org/10.1080/23802359.2019.1661303 |
| _version_ | 1827773343432966144 |
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| author | Xue-Ying Yao Zhi-Xiang Chen Qi-Zhi Wang |
| author_facet | Xue-Ying Yao Zhi-Xiang Chen Qi-Zhi Wang |
| author_sort | Xue-Ying Yao |
| collection | DOAJ |
| description | Torilis scabra (Thunb.) DC. is widely distributed in China and Japan and has been introduced to North America. In this study, the complete chloroplast genome sequence of the T. scabra was obtained by de novo assembly using the NGS data. The chloroplast genome of T. scabra was 157,855 bp in length and divided into four distinct regions, such as large single-copy region (85,362 bp), small single-copy region (17,993 bp), and a pair of inverted repeat regions (27,250 bp). The genome annotation predicted a total of 127 genes, including 82 protein-coding genes, 37 tRNA genes, and 8 rRNA genes. Phylogenetic analysis with reported chloroplast genomes showed that T. scabra has a close genetic relationship with Anthriscus cerefolium. |
| first_indexed | 2024-03-11T13:20:41Z |
| format | Article |
| id | doaj.art-890228c5d46c41fdbea011b758cabc90 |
| institution | Directory Open Access Journal |
| issn | 2380-2359 |
| language | English |
| last_indexed | 2024-03-11T13:20:41Z |
| publishDate | 2019-07-01 |
| publisher | Taylor & Francis Group |
| record_format | Article |
| series | Mitochondrial DNA. Part B. Resources |
| spelling | doaj.art-890228c5d46c41fdbea011b758cabc902023-11-03T10:28:37ZengTaylor & Francis GroupMitochondrial DNA. Part B. Resources2380-23592019-07-01422914291510.1080/23802359.2019.16613031661303The complete chloroplast genome of Torilis scabra (Apiaceae)Xue-Ying Yao0Zhi-Xiang Chen1Qi-Zhi Wang2Huaqiao UniversityHuaqiao UniversityHuaqiao UniversityTorilis scabra (Thunb.) DC. is widely distributed in China and Japan and has been introduced to North America. In this study, the complete chloroplast genome sequence of the T. scabra was obtained by de novo assembly using the NGS data. The chloroplast genome of T. scabra was 157,855 bp in length and divided into four distinct regions, such as large single-copy region (85,362 bp), small single-copy region (17,993 bp), and a pair of inverted repeat regions (27,250 bp). The genome annotation predicted a total of 127 genes, including 82 protein-coding genes, 37 tRNA genes, and 8 rRNA genes. Phylogenetic analysis with reported chloroplast genomes showed that T. scabra has a close genetic relationship with Anthriscus cerefolium.http://dx.doi.org/10.1080/23802359.2019.1661303torilis scabra (thunb.) dc.complete chloroplast genomeapiaceae |
| spellingShingle | Xue-Ying Yao Zhi-Xiang Chen Qi-Zhi Wang The complete chloroplast genome of Torilis scabra (Apiaceae) Mitochondrial DNA. Part B. Resources torilis scabra (thunb.) dc. complete chloroplast genome apiaceae |
| title | The complete chloroplast genome of Torilis scabra (Apiaceae) |
| title_full | The complete chloroplast genome of Torilis scabra (Apiaceae) |
| title_fullStr | The complete chloroplast genome of Torilis scabra (Apiaceae) |
| title_full_unstemmed | The complete chloroplast genome of Torilis scabra (Apiaceae) |
| title_short | The complete chloroplast genome of Torilis scabra (Apiaceae) |
| title_sort | complete chloroplast genome of torilis scabra apiaceae |
| topic | torilis scabra (thunb.) dc. complete chloroplast genome apiaceae |
| url | http://dx.doi.org/10.1080/23802359.2019.1661303 |
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