MC180295 is a highly potent and selective CDK9 inhibitor with preclinical in vitro and in vivo efficacy in cancer

Abstract Background Inhibition of cyclin-dependent kinase 9 (CDK9), a novel epigenetic target in cancer, can reactivate epigenetically silenced genes in cancer by dephosphorylating the SWI/SNF chromatin remodeler BRG1. Here, we characterized the anti-tumor efficacy of MC180295, a newly developed CDK...

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Main Authors: Hanghang Zhang, Chen Huang, John Gordon, Sijia Yu, George Morton, Wayne Childers, Magid Abou-Gharbia, Yi Zhang, Jaroslav Jelinek, Jean-Pierre J. Issa
Format: Article
Language:English
Published: BMC 2024-01-01
Series:Clinical Epigenetics
Subjects:
Online Access:https://doi.org/10.1186/s13148-023-01617-3
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author Hanghang Zhang
Chen Huang
John Gordon
Sijia Yu
George Morton
Wayne Childers
Magid Abou-Gharbia
Yi Zhang
Jaroslav Jelinek
Jean-Pierre J. Issa
author_facet Hanghang Zhang
Chen Huang
John Gordon
Sijia Yu
George Morton
Wayne Childers
Magid Abou-Gharbia
Yi Zhang
Jaroslav Jelinek
Jean-Pierre J. Issa
author_sort Hanghang Zhang
collection DOAJ
description Abstract Background Inhibition of cyclin-dependent kinase 9 (CDK9), a novel epigenetic target in cancer, can reactivate epigenetically silenced genes in cancer by dephosphorylating the SWI/SNF chromatin remodeler BRG1. Here, we characterized the anti-tumor efficacy of MC180295, a newly developed CDK9 inhibitor. Methods In this study, we explored the pharmacokinetics of MC180295 in mice and rats, and tested the anti-tumor efficacy of MC180295, and its enantiomers, in multiple cancer cell lines and mouse models. We also combined CDK9 inhibition with a DNA methyltransferase (DNMT) inhibitor, decitabine, in multiple mouse models, and tested MC180295 dependence on T cells. Drug toxicity was measured by checking body weights and complete blood counts. Results MC180295 had high specificity for CDK9 and high potency against multiple neoplastic cell lines (median IC50 of 171 nM in 46 cell lines representing 6 different malignancies), with the highest potency seen in AML cell lines derived from patients with MLL translocations. MC180295 is a racemic mixture of two enantiomers, MC180379 and MC180380, with MC180380 showing higher potency in a live-cell epigenetic assay. Both MC180295 and MC180380 showed efficacy in in vivo AML and colon cancer xenograft models, and significant synergy with decitabine in both cancer models. Lastly, we found that CDK9 inhibition-mediated anti-tumoral effects were partially dependent on CD8 + T cells in vivo, indicating a significant immune component to the response. Conclusions MC180380, an inhibitor of cyclin-dependent kinase 9 (CDK9), is an efficacious anti-cancer agent worth advancing further toward clinical use.
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spelling doaj.art-892c78200eb14c6280a512cb5e5194fd2024-01-07T12:31:18ZengBMCClinical Epigenetics1868-70832024-01-0116111410.1186/s13148-023-01617-3MC180295 is a highly potent and selective CDK9 inhibitor with preclinical in vitro and in vivo efficacy in cancerHanghang Zhang0Chen Huang1John Gordon2Sijia Yu3George Morton4Wayne Childers5Magid Abou-Gharbia6Yi Zhang7Jaroslav Jelinek8Jean-Pierre J. Issa9Fels Institute for Cancer Research, Lewis Katz School of Medicine at Temple UniversityFels Institute for Cancer Research, Lewis Katz School of Medicine at Temple UniversityMoulder Center for Drug Discovery Research, Temple University School of PharmacyFels Institute for Cancer Research, Lewis Katz School of Medicine at Temple UniversityMoulder Center for Drug Discovery Research, Temple University School of PharmacyMoulder Center for Drug Discovery Research, Temple University School of PharmacyMoulder Center for Drug Discovery Research, Temple University School of PharmacyFels Institute for Cancer Research, Lewis Katz School of Medicine at Temple UniversityFels Institute for Cancer Research, Lewis Katz School of Medicine at Temple UniversityFels Institute for Cancer Research, Lewis Katz School of Medicine at Temple UniversityAbstract Background Inhibition of cyclin-dependent kinase 9 (CDK9), a novel epigenetic target in cancer, can reactivate epigenetically silenced genes in cancer by dephosphorylating the SWI/SNF chromatin remodeler BRG1. Here, we characterized the anti-tumor efficacy of MC180295, a newly developed CDK9 inhibitor. Methods In this study, we explored the pharmacokinetics of MC180295 in mice and rats, and tested the anti-tumor efficacy of MC180295, and its enantiomers, in multiple cancer cell lines and mouse models. We also combined CDK9 inhibition with a DNA methyltransferase (DNMT) inhibitor, decitabine, in multiple mouse models, and tested MC180295 dependence on T cells. Drug toxicity was measured by checking body weights and complete blood counts. Results MC180295 had high specificity for CDK9 and high potency against multiple neoplastic cell lines (median IC50 of 171 nM in 46 cell lines representing 6 different malignancies), with the highest potency seen in AML cell lines derived from patients with MLL translocations. MC180295 is a racemic mixture of two enantiomers, MC180379 and MC180380, with MC180380 showing higher potency in a live-cell epigenetic assay. Both MC180295 and MC180380 showed efficacy in in vivo AML and colon cancer xenograft models, and significant synergy with decitabine in both cancer models. Lastly, we found that CDK9 inhibition-mediated anti-tumoral effects were partially dependent on CD8 + T cells in vivo, indicating a significant immune component to the response. Conclusions MC180380, an inhibitor of cyclin-dependent kinase 9 (CDK9), is an efficacious anti-cancer agent worth advancing further toward clinical use.https://doi.org/10.1186/s13148-023-01617-3Epigenetic therapyCDK9ImmunosensitizationMC180380Anti-tumoral effects
spellingShingle Hanghang Zhang
Chen Huang
John Gordon
Sijia Yu
George Morton
Wayne Childers
Magid Abou-Gharbia
Yi Zhang
Jaroslav Jelinek
Jean-Pierre J. Issa
MC180295 is a highly potent and selective CDK9 inhibitor with preclinical in vitro and in vivo efficacy in cancer
Clinical Epigenetics
Epigenetic therapy
CDK9
Immunosensitization
MC180380
Anti-tumoral effects
title MC180295 is a highly potent and selective CDK9 inhibitor with preclinical in vitro and in vivo efficacy in cancer
title_full MC180295 is a highly potent and selective CDK9 inhibitor with preclinical in vitro and in vivo efficacy in cancer
title_fullStr MC180295 is a highly potent and selective CDK9 inhibitor with preclinical in vitro and in vivo efficacy in cancer
title_full_unstemmed MC180295 is a highly potent and selective CDK9 inhibitor with preclinical in vitro and in vivo efficacy in cancer
title_short MC180295 is a highly potent and selective CDK9 inhibitor with preclinical in vitro and in vivo efficacy in cancer
title_sort mc180295 is a highly potent and selective cdk9 inhibitor with preclinical in vitro and in vivo efficacy in cancer
topic Epigenetic therapy
CDK9
Immunosensitization
MC180380
Anti-tumoral effects
url https://doi.org/10.1186/s13148-023-01617-3
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