Complete mitochondrial genome of smoothshell shrimp Parapenaeopsis tenella (Bate, 1888) (Crustacea: Decapoda: Penaeidae)
In this study, the complete mitochondrial genome of smoothshell shrimp Parapenaeopsis tenella was determined for the first time. The mitogenome of P. tenella is 15,893 bp in length and encodes 13 protein-coding genes (PCGs), 22 tRNA genes, 2 rRNA genes, and a control region (CR). The overall base co...
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| Format: | Article |
| Language: | English |
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Taylor & Francis Group
2019-01-01
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| Series: | Mitochondrial DNA. Part B. Resources |
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| Online Access: | http://dx.doi.org/10.1080/23802359.2019.1567283 |
| _version_ | 1797640484511809536 |
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| author | Xianliang Meng Baoquan Gao Jian Li Ping Liu |
| author_facet | Xianliang Meng Baoquan Gao Jian Li Ping Liu |
| author_sort | Xianliang Meng |
| collection | DOAJ |
| description | In this study, the complete mitochondrial genome of smoothshell shrimp Parapenaeopsis tenella was determined for the first time. The mitogenome of P. tenella is 15,893 bp in length and encodes 13 protein-coding genes (PCGs), 22 tRNA genes, 2 rRNA genes, and a control region (CR). The overall base composition is 34.0%, 35.3%, 11.9%, and 18.9% for A, T, C, and G, respectively. All PCGs are initiated by ATN codons. Four of the 13 PCGs harbor the incomplete termination codon by T. Twenty-one tRNA genes have a typical clover-leaf structure of mitochondrial tRNA, except for tRNA-Ser (AGC), in which the dihydrouridine (DHU) arm stem is absent. Phylogenetic analysis among the available malacostracans species supports the current morphology-based hypothesis that P. tenella is grouped to the genus Parapenaeopsis. |
| first_indexed | 2024-03-11T13:32:34Z |
| format | Article |
| id | doaj.art-8aaf3306e7354c42993103293358a741 |
| institution | Directory Open Access Journal |
| issn | 2380-2359 |
| language | English |
| last_indexed | 2024-03-11T13:32:34Z |
| publishDate | 2019-01-01 |
| publisher | Taylor & Francis Group |
| record_format | Article |
| series | Mitochondrial DNA. Part B. Resources |
| spelling | doaj.art-8aaf3306e7354c42993103293358a7412023-11-02T16:07:26ZengTaylor & Francis GroupMitochondrial DNA. Part B. Resources2380-23592019-01-014179379410.1080/23802359.2019.15672831567283Complete mitochondrial genome of smoothshell shrimp Parapenaeopsis tenella (Bate, 1888) (Crustacea: Decapoda: Penaeidae)Xianliang Meng0Baoquan Gao1Jian Li2Ping Liu3Yellow Sea Fisheries Research Institute Chinese Academy of Fisheries ScienceYellow Sea Fisheries Research Institute Chinese Academy of Fisheries ScienceYellow Sea Fisheries Research Institute Chinese Academy of Fisheries ScienceYellow Sea Fisheries Research Institute Chinese Academy of Fisheries ScienceIn this study, the complete mitochondrial genome of smoothshell shrimp Parapenaeopsis tenella was determined for the first time. The mitogenome of P. tenella is 15,893 bp in length and encodes 13 protein-coding genes (PCGs), 22 tRNA genes, 2 rRNA genes, and a control region (CR). The overall base composition is 34.0%, 35.3%, 11.9%, and 18.9% for A, T, C, and G, respectively. All PCGs are initiated by ATN codons. Four of the 13 PCGs harbor the incomplete termination codon by T. Twenty-one tRNA genes have a typical clover-leaf structure of mitochondrial tRNA, except for tRNA-Ser (AGC), in which the dihydrouridine (DHU) arm stem is absent. Phylogenetic analysis among the available malacostracans species supports the current morphology-based hypothesis that P. tenella is grouped to the genus Parapenaeopsis.http://dx.doi.org/10.1080/23802359.2019.1567283parapenaeopsis tenellamitochondrial genomephylogenetic tree |
| spellingShingle | Xianliang Meng Baoquan Gao Jian Li Ping Liu Complete mitochondrial genome of smoothshell shrimp Parapenaeopsis tenella (Bate, 1888) (Crustacea: Decapoda: Penaeidae) Mitochondrial DNA. Part B. Resources parapenaeopsis tenella mitochondrial genome phylogenetic tree |
| title | Complete mitochondrial genome of smoothshell shrimp Parapenaeopsis tenella (Bate, 1888) (Crustacea: Decapoda: Penaeidae) |
| title_full | Complete mitochondrial genome of smoothshell shrimp Parapenaeopsis tenella (Bate, 1888) (Crustacea: Decapoda: Penaeidae) |
| title_fullStr | Complete mitochondrial genome of smoothshell shrimp Parapenaeopsis tenella (Bate, 1888) (Crustacea: Decapoda: Penaeidae) |
| title_full_unstemmed | Complete mitochondrial genome of smoothshell shrimp Parapenaeopsis tenella (Bate, 1888) (Crustacea: Decapoda: Penaeidae) |
| title_short | Complete mitochondrial genome of smoothshell shrimp Parapenaeopsis tenella (Bate, 1888) (Crustacea: Decapoda: Penaeidae) |
| title_sort | complete mitochondrial genome of smoothshell shrimp parapenaeopsis tenella bate 1888 crustacea decapoda penaeidae |
| topic | parapenaeopsis tenella mitochondrial genome phylogenetic tree |
| url | http://dx.doi.org/10.1080/23802359.2019.1567283 |
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