Complete plastid genome of Lespedeza tricolor (Fabaceae), an endemic shrub in Korea
Lespedeza tricolor is a species found in the southern province of Korea, thought to be endemic to Korea. The complete plastid genome of this legume was sequenced in this study. DNA from L. tricolor was extracted, sequenced, and assembled into the complete plastid genome. We used 18 species of the fa...
| Main Authors: | , , , , |
|---|---|
| Format: | Article |
| Language: | English |
| Published: |
Taylor & Francis Group
2022-10-01
|
| Series: | Mitochondrial DNA. Part B. Resources |
| Subjects: | |
| Online Access: | http://dx.doi.org/10.1080/23802359.2022.2130714 |
| _version_ | 1827772177118658560 |
|---|---|
| author | Tae-Hee Kim Sang-Chul Kim Young-Ho Ha Kyung Choi Hyuk-Jin Kim |
| author_facet | Tae-Hee Kim Sang-Chul Kim Young-Ho Ha Kyung Choi Hyuk-Jin Kim |
| author_sort | Tae-Hee Kim |
| collection | DOAJ |
| description | Lespedeza tricolor is a species found in the southern province of Korea, thought to be endemic to Korea. The complete plastid genome of this legume was sequenced in this study. DNA from L. tricolor was extracted, sequenced, and assembled into the complete plastid genome. We used 18 species of the family Fabaceae and 77 protein-coding genes to perform phylogenetic analysis. The plastid genome is 149,038 bp in length, with large (82,495 bp) and small (18,889 bp) single-copy regions, separated by a pair of inverted repeat regions (23,827 bp). It contains 83 protein-coding genes, eight rRNAs, 37 tRNAs, and two pseudogenes (rpl22 and infA). Our phylogenetic analysis suggests that the genus Lespedeza is monophyletic and L. tricolor is closely related to L. maritima and L. buergeri. In this study, we identified the phylogenetic position of L. tricolor and provided the data that can be used in various ways in future studies. |
| first_indexed | 2024-03-11T13:04:42Z |
| format | Article |
| id | doaj.art-8ac53a538c7646f88d99fa9bab61f9eb |
| institution | Directory Open Access Journal |
| issn | 2380-2359 |
| language | English |
| last_indexed | 2024-03-11T13:04:42Z |
| publishDate | 2022-10-01 |
| publisher | Taylor & Francis Group |
| record_format | Article |
| series | Mitochondrial DNA. Part B. Resources |
| spelling | doaj.art-8ac53a538c7646f88d99fa9bab61f9eb2023-11-03T14:44:05ZengTaylor & Francis GroupMitochondrial DNA. Part B. Resources2380-23592022-10-017101800180210.1080/23802359.2022.21307142130714Complete plastid genome of Lespedeza tricolor (Fabaceae), an endemic shrub in KoreaTae-Hee Kim0Sang-Chul Kim1Young-Ho Ha2Kyung Choi3Hyuk-Jin Kim4Division of Forest Biodiversity, Korea National ArboretumDivision of Forest Biodiversity, Korea National ArboretumDivision of Forest Biodiversity, Korea National ArboretumDivision of Forest Biodiversity, Korea National ArboretumDivision of Forest Biodiversity, Korea National ArboretumLespedeza tricolor is a species found in the southern province of Korea, thought to be endemic to Korea. The complete plastid genome of this legume was sequenced in this study. DNA from L. tricolor was extracted, sequenced, and assembled into the complete plastid genome. We used 18 species of the family Fabaceae and 77 protein-coding genes to perform phylogenetic analysis. The plastid genome is 149,038 bp in length, with large (82,495 bp) and small (18,889 bp) single-copy regions, separated by a pair of inverted repeat regions (23,827 bp). It contains 83 protein-coding genes, eight rRNAs, 37 tRNAs, and two pseudogenes (rpl22 and infA). Our phylogenetic analysis suggests that the genus Lespedeza is monophyletic and L. tricolor is closely related to L. maritima and L. buergeri. In this study, we identified the phylogenetic position of L. tricolor and provided the data that can be used in various ways in future studies.http://dx.doi.org/10.1080/23802359.2022.2130714plastid genomelespedeza tricolorkorean endemic speciesphylogenetic relationship |
| spellingShingle | Tae-Hee Kim Sang-Chul Kim Young-Ho Ha Kyung Choi Hyuk-Jin Kim Complete plastid genome of Lespedeza tricolor (Fabaceae), an endemic shrub in Korea Mitochondrial DNA. Part B. Resources plastid genome lespedeza tricolor korean endemic species phylogenetic relationship |
| title | Complete plastid genome of Lespedeza tricolor (Fabaceae), an endemic shrub in Korea |
| title_full | Complete plastid genome of Lespedeza tricolor (Fabaceae), an endemic shrub in Korea |
| title_fullStr | Complete plastid genome of Lespedeza tricolor (Fabaceae), an endemic shrub in Korea |
| title_full_unstemmed | Complete plastid genome of Lespedeza tricolor (Fabaceae), an endemic shrub in Korea |
| title_short | Complete plastid genome of Lespedeza tricolor (Fabaceae), an endemic shrub in Korea |
| title_sort | complete plastid genome of lespedeza tricolor fabaceae an endemic shrub in korea |
| topic | plastid genome lespedeza tricolor korean endemic species phylogenetic relationship |
| url | http://dx.doi.org/10.1080/23802359.2022.2130714 |
| work_keys_str_mv | AT taeheekim completeplastidgenomeoflespedezatricolorfabaceaeanendemicshrubinkorea AT sangchulkim completeplastidgenomeoflespedezatricolorfabaceaeanendemicshrubinkorea AT younghoha completeplastidgenomeoflespedezatricolorfabaceaeanendemicshrubinkorea AT kyungchoi completeplastidgenomeoflespedezatricolorfabaceaeanendemicshrubinkorea AT hyukjinkim completeplastidgenomeoflespedezatricolorfabaceaeanendemicshrubinkorea |