Morphological Diversity of Dps Complex with Genomic DNA

In response to adverse environmental factors, <i>Escherichia coli</i> cells actively produce Dps proteins which form ordered complexes (biocrystals) with bacterial DNA to protect the genome. The effect of biocrystallization has been described extensively in the scientific literature; fur...

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Bibliographic Details
Main Authors: Yuri Chesnokov, Roman Kamyshinsky, Andrey Mozhaev, Eleonora Shtykova, Alexander Vasiliev, Ivan Orlov, Liubov Dadinova
Format: Article
Language:English
Published: MDPI AG 2023-05-01
Series:International Journal of Molecular Sciences
Subjects:
Online Access:https://www.mdpi.com/1422-0067/24/10/8534
Description
Summary:In response to adverse environmental factors, <i>Escherichia coli</i> cells actively produce Dps proteins which form ordered complexes (biocrystals) with bacterial DNA to protect the genome. The effect of biocrystallization has been described extensively in the scientific literature; furthermore, to date, the structure of the Dps–DNA complex has been established in detail in vitro using plasmid DNA. In the present work, for the first time, Dps complexes with <i>E. coli</i> genomic DNA were studied in vitro using cryo-electron tomography. We demonstrate that genomic DNA forms one-dimensional crystals or filament-like assemblies which transform into weakly ordered complexes with triclinic unit cells, similar to what is observed for plasmid DNA. Changing such environmental factors as pH and KCl and MgCl<sub>2</sub> concentrations leads to the formation of cylindrical structures.
ISSN:1661-6596
1422-0067