Characterization of the complete chloroplast genome of Calophaca sinica Rehd.

Characterization of the complete chloroplast genome of Calophaca sinica Rehd.

Calophaca sinica Rehd. is a tree species with high economic value, whose resource has been declining due to unreasonable exploitation. In this study, we sequenced, assembled, and annotated the complete chloroplast genome of C. sinica. The whole chloroplast genome size is 129,345 bp, it lacks an inve...

Full description

Bibliographic Details
Main Authors: Bin Guo, Zhi-Li Zheng, Kai Gao, Jia-Lin Ma, Jian-Yi Wang, Fei Yang, Xin-Min An
Format: Article
Language:English
Published: Taylor & Francis Group 2020-01-01
Series:Mitochondrial DNA. Part B. Resources
Subjects:
calophaca sinica
chloroplast genome
phylogenetic analysis
Online Access:http://dx.doi.org/10.1080/23802359.2019.1710608
Description
Summary:Calophaca sinica Rehd. is a tree species with high economic value, whose resource has been declining due to unreasonable exploitation. In this study, we sequenced, assembled, and annotated the complete chloroplast genome of C. sinica. The whole chloroplast genome size is 129,345 bp, it lacks an inverted repeat (IR) region. The GC content of the whole chloroplast genome is 34.51%. The chloroplast genome comprises 112 unique genes, including 77 protein-coding genes (PCGs), 30 transfer RNA (tRNA) genes, and 5 ribosomal RNA (rRNA) genes. Phylogenetic analyses of chloroplast genomes derived from 15 species indicated that C. sinica is close to Caragana and Tibetia species in Papilionoideae.
ISSN:2380-2359

Similar Items